AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXNATCCAAGAGGATCCGCG
GAATTCCAAGCGTATCCATGCTGTATTTCTCTCAGTGACATGTTCTGTGA
CTGTGAAAGTCAGTTAGATAAAGTCTCCAAGCCAACCTAAGGTGAATCAT
TGCTTCTTGCTGGCTTTGAGGAGCTAGTTCATTTTGTATCTGCCTGGCAA
GGGACACATGGCATGGTAAAATGAGGCATAGAGAGGTCTTCATAAAGAAA
TCATTTTCACCGCTGTCAGCAACTATAGGGGAAGTCGTAAGGAGGAAGGA
AGCATCCTCAGATCCAAGAAAGCGAGGGGAGAAGAAGGATGGCTATGACG
CTTCACAGAAAGTTGCTCCAGTTGTAAGACGGGGCACGCTGACTTTCAGG
GAGTAAGAAGACCTGCAAGAAAGGAACAGGTGGATAGATATTCCTATCTC
ACAGTTTTGTATTGATGTACAGCCCAGGCTTCCCATTGGCTAAGCGAACT
GGGAACTAAAGGACGGCGGAACATATACATGTGTACAGAGGTCCTCTTTC
TCAGAAGAAACACAGAGAGGGTGTGGGGAGCTTCTGGAGGAACATGGTGG
CCCACTCTTAGCAACGTTGAATTCATCACTGATGCTTTAAAGGCTTCTTT
TTGTATCTCAAGTGGCCATCCCTGTTGCGTTGAGTTGGATAACTCCCCTC
CCCTGCGTGGA

TTCCTTACCCTCTNNTCCTCTNCNCACCGCCCGTTCTTCACCGGTCTTCC
TACATANTTATTATTNCCGCCGTNCTCGTGGTCTTCCGTGCGCTTTTGTC
TGCGTGGCCGCCTTCCGTTTCGACACTGATCGCCCTTGCCGTTGCGGCCG
CCTGTCGCTTGCTTCGTTCTCGTACTTTACGGGGCGCGGGCCCTTCTGAG
TGTGCGTTCGGTAGCGCGCGTGTTTACACCTCCCGTTGACCACGTCCGCG
TTCCTTTTACTCGTAGATTCGGGTCGAGTGCGGGTGGGCTCCATGCTTTG
GTCGATGACTCCCCCGTTTGTGTTGACCTTACGCGCTCGGTCCAGCACAT
CCACATATACCCATAATTGCGGTCGCGTCGTGAATTGTTCGGTACCGGTT
TTCAGAATCCGTGTGGATCGCCCACCAGACAGGAAATATACCATGTGCGT
CGGAGACGGCAGCGACGGTTGCACAGTGTCTTTTCCACAAGCCGACGCAT
AACGCGCATTATGCCGTCGCGCGCACGTGATCGCCCCGTTCAGATACAAT
ATTACACTATATGAGACACGTAAATAGGCGAAACCTATCATGTGACCACA
CAGTATAAAACGCCCAGTGTAATGGTACCAATCGATCCATCGCTGTATCC
GCGCTAAAGCGACACATAATACCATGCGGTTACGCCGACGGTGTATAATT
CGGGCGTACGATGGTCGATAAACTTACCAGAGTACGGCGTATAATACGTA
CGCGCACTCTCTTACGTTTCGACGCGCCATAATAATACCAACCATATGGT
ACCGCCACTTAACGCCGCGAATTGGACGAACCAAGACTGCCACACTGCCG
ACTACGCGGCCAATACACCCATTCATGAATATTGTCGTATATATGCGATC
AACCGCATTACAGATCACATCGTTTACGACTCCGCGACATACATGTCTCG
TTTATGCGCACGACTTCGCGTATACTTGTACCGACATAGTTATATCTTTA
ANCCAGCGTGGCGTTAAACCTTACGAGCTAATATAA

Query= MSMg01no149_p04.b1 MSMg01no149_p04.b1 CHROMAT_FILE:
MSMg01no149_p04.b1 PHD_FILE: MSMg01no149_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:22 2005
         (668 letters)



>mm_chr2_66106670_66107737
          Length = 1068

 Score = 1197 bits (619), Expect = 0.0
 Identities = 646/661 (97%), Gaps = 10/661 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattccaagcgtatccatgctgtatttctctcagtgacatgttctgtgactgtgaaagt 67
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccaagcgtaaccatgctgtatttctctcagtgacatgttctgtgactgtgaaagt 267

                                                                       
Query: 68  cagttagataaagtctccaagccaacctaaggtgaatcattgcttcttgctggctttgag 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cagttagataaagtctccaagccaacctaaggtgaatcattgcttcttgctggctttgag 327

                                                                       
Query: 128 gagctagttcattttgtatctgcctggcaagggacacatggcatggtaaaatgaggcata 187
           ||||||||||          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagctagttc----------tgcctggcaagggacacatggcatggtaaaatgaggcata 377

                                                                       
Query: 188 gagaggtcttcataaagaaatcattttcaccgctgtcagcaactataggggaagtcgtaa 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gagaggtcttcataaagaaatcattttcaccgctgtcagcaactataggggaagtcgtaa 437

                                                                       
Query: 248 ggaggaaggaagcatcctcagatccaagaaagcgaggggagaagaaggatggctatgacg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggaggaaggaagcatcctcagatccaagaaagcgaggggagaagaaggatggctatgacg 497

                                                                       
Query: 308 cttcacagaaagttgctccagttgtaagacggggcacgctgactttcagggagtaagaag 367
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 498 cttcacagaaagttgctccagttgtaagacggggcatgctgactttcagggagtaagaag 557

                                                                       
Query: 368 acctgcaagaaaggaacaggtggatagatattcctatctcacagttttgtattgatgtac 427
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 558 acctgcaagaaaggaacaggtggatagatattcctatctcacagttttgtattgatgtcc 617

                                                                       
Query: 428 agcccaggcttcccattggctaagcgaactgggaactaaaggacggcggaacatatacat 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agcccaggcttcccattggctaagcgaactgggaactaaaggacggcggaacatatacat 677

                                                                       
Query: 488 gtgtacagaggtcctctttctcagaagaaacacagagagggtgtggggagcttctggagg 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtgtacagaggtcctctttctcagaagaaacacagagagggtgtggggagcttctggagg 737

                                                                       
Query: 548 aacatggtggcccactcttagcaacgttgaattcatcactgatgctttaaaggcttcttt 607
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 738 aacatggtggcccactcttagcaacgttgaattcatcagtgatgctttaaaggcttcttt 797

                                                                       
Query: 608 ttgtatctcaagtggccatccctgttgcgttgagttggataactcccctcccctgcgtgg 667
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atgtatctcaagtggccatccctgttgcgttgagttggataactcccctcccctgcgtgg 857

            
Query: 668 a 668
           |
Sbjct: 858 a 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)