Query= MSMg01no150_g04.b1 MSMg01no150_g04.b1 CHROMAT_FILE:
MSMg01no150_g04.b1 PHD_FILE: MSMg01no150_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:56 2005
(330 letters)
>mm_chr2_16009249_16009978
Length = 730
Score = 609 bits (315), Expect = e-179
Identities = 324/327 (99%)
Strand = Plus / Plus
Query: 4 ggaattcatatgttcttatggaaacctgatgacttctgctcccttttaacctcagtgaga 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatatgttctcatggaaacctgatgacttctgctcccttttaacctcagtgaga 263
Query: 64 ttctgctacagcttcttcattctcagatgcaattaatctgggtcaattcttataatcagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttctgctacagcttcttcattctcagatgcaattaatctgggtcaattcttataatcagt 323
Query: 124 tcatagctgaaggttttatctggacaatcaagctagttttcacagactatgaataaaacc 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcatagttgaaggttttatctggacaatcaagctagttttcacagactatgaataaaacc 383
Query: 184 ccttggtgtgtattatgtatatgtgtgtgtgcatgtgtgtgcatgtggatgtgcatatat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttggtgtgtattatgtatatgtgtgtgtgcatgtgtgtgcatgtggatgtgcatatat 443
Query: 244 gcgtttgtgtgtatgtgtatatatgtctgtacatctatgtgtgtgcatgtgtgtgtatgt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 gcgtttgtgtgtatgtgtatatatgtctgtacatctatgtgtgtgcatgtgtatgtatgt 503
Query: 304 gtgtatatgcttgtatgtatatgtgtt 330
|||||||||||||||||||||||||||
Sbjct: 504 gtgtatatgcttgtatgtatatgtgtt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_g04.g1 MSMg01no150_g04.g1 CHROMAT_FILE:
MSMg01no150_g04.g1 PHD_FILE: MSMg01no150_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:56 2005
(430 letters)
>mm_chr2_16131558_16132387
Length = 830
Score = 764 bits (395), Expect = 0.0
Identities = 419/431 (97%), Gaps = 8/431 (1%)
Strand = Plus / Minus
Query: 1 cagtgattaatttgcttggactaatttcccccataactaattagcttcagcatgtttcct 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cagtgattaatttgtttggactaatttcccccataactaattagcttcagcatgtttcct 568
Query: 61 aaaattcctaagtattaggcagagcccacctgaaataaaaagataaatatcctccattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aaaattcctaagtattaggcagagcccacctgaaataaaaagataaatatcctccattca 508
Query: 121 tgcataagggtctggtttttttatacaaagaggagaaagaaaatataattagattctttt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgcataagggtctgttttttttatacaaagaggagaaagaaaatataattagattctttt 448
Query: 181 agctacaaccaacccactaatctttcctaaattgcagcaggtcttctgctattagcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agctacaaccaacccactaatctttcctaaattgcagcaggtcttctgctattagcaggt 388
Query: 241 tctgatcaaggtgtcagtggaataactcatttctgggtgtacttggcaacacccattcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tctgatcaaggtgtcagtggaataactcatttctgggtgtacttggcaacacccattcat 328
Query: 301 tactttcccacacctggaacacaagctcatcttgtccttcttgcccccc----gcgtaca 356
||||||||||||||||||||||||||||||||||||||||||| | | |||||
Sbjct: 327 tactttcccacacctggaacacaagctcatcttgtccttcttg----tcatttgtgtaca 272
Query: 357 cgccccagctcatttgtcacactgccagggcaaacaaggagcagccacacacttactgag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cgccccagctcatttgtcacactgccagggcaaacaaggagcagccacacacttactgag 212
Query: 417 cttgtgtttac 427
|||||||||||
Sbjct: 211 cttgtgtttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
