Query= MSMg01no151_b17.b1 MSMg01no151_b17.b1 CHROMAT_FILE:
MSMg01no151_b17.b1 PHD_FILE: MSMg01no151_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:50 2005
(367 letters)
>mm_chr2_169784347_169785113
Length = 767
Score = 646 bits (334), Expect = 0.0
Identities = 357/366 (97%), Gaps = 4/366 (1%)
Strand = Plus / Minus
Query: 5 gaattccagactgtccctaatgagcctcacctgggctaattacttttc---ttttctttt 61
||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 584 gaattccagactggctctaatgagcctcacctgggctaattacttttctttttttctttt 525
Query: 62 -ttctttttttttttttttgcacaccctgccaggcaggttggagttgccaactggtcaaa 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttttttttttttttttttgcacaccctgccaggcaggttggagttgccaactggtcaaa 465
Query: 121 cagaatgattgctgatggcgcgcgggattgctcagaggaatagaaggactgggggcttgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 464 cagaatgattgctgatggcgcgcgggattgctcagaggaatagaaggactggggacttgg 405
Query: 181 gctactccctcatgtggccactgaaccagaaagaaatgaaaaatgtggagtcagggtggt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcaactccctcatgtggccactgaaccagaaagaaatgaaaaatgtggagtcagggtggt 345
Query: 241 atctagcgccccctaccctaagtatgtatgcatctgccggtctgagagaaatgcggactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atctagcgccccctaccctaagtatgtatgcatctgccggtctgagagaaatgcggactt 285
Query: 301 ccaggtatggtggtttgattgaggaatgtccctcgtgggctcagctatttgagcagttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccaggtatggtggtttgattgaggaatgtccctcgtgggctcagctatttgagcagttgg 225
Query: 361 tctcca 366
||||||
Sbjct: 224 tctcca 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_b17.g1 MSMg01no151_b17.g1 CHROMAT_FILE:
MSMg01no151_b17.g1 PHD_FILE: MSMg01no151_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:50 2005
(274 letters)
>mm_chr2_169612685_169613358
Length = 674
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%)
Strand = Plus / Plus
Query: 1 ctgctgtctttggtagagttttcgtggttttatatttgagaccacgtaataaataaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgctgtctttggtagagttttcgtggttttatatttgagaccacgtaataaataaatgt 260
Query: 61 gtaattgccctcaacatgatgcaagaccagacggtgaggatgaaagggaaaaaaaaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gtaattgccctcaacatgatgcaagaccagacggtgaggatgaaaggaaaaaaaaaatcc 320
Query: 121 tgttacagcataaaaatttattaggatccccattggtaggcaaggcagggctgtgtgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttacagcataaaaatttattaggatccccattggtaggcaaggcagggctgtgtgaac 380
Query: 181 aaagaattgctccaagaattgtgcaattgaccaaggcaatgaaggacaaatcccaccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagaattgctccaagaattgtgcaattgaccaaggcaatgaaggacaaatcccaccagg 440
Query: 241 ccctcatggaggaggtgccgggggagaggacgg 273
||| | ||||||||||||| |||||||||||||
Sbjct: 441 cccgcctggaggaggtgccaggggagaggacgg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
