Query= MSMg01no152_g14.b1 MSMg01no152_g14.b1 CHROMAT_FILE:
MSMg01no152_g14.b1 PHD_FILE: MSMg01no152_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:29 2005
(629 letters)
>mm_chr2_102694722_102695757
Length = 1036
Score = 1007 bits (521), Expect = 0.0
Identities = 603/637 (94%), Gaps = 15/637 (2%)
Strand = Plus / Minus
Query: 4 ggaattccctgcatgtataactgatgtacatgctatgaaggacacaagcttcctgatgtg 63
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 836 ggaattccctgcatgtataactgatgtacatgctatgaaagacacaggcttcctgatgtg 777
Query: 64 tgtttcaataacatttgtgccacatccacctcagatcatctgtagaaaa-tacatgtgct 122
|||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 776 tgtttcaataacatttgtgccacacccacctctgatcatctgtagaaaattacatgtg-- 719
Query: 123 aacttagaagatgggaaaccctcctcagaactttacagcaggtaaccttataaaacctta 182
|||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||
Sbjct: 718 --cttagaagatgggaaaccttcctcagagctttccagcaggtaaccttataaaacctta 661
Query: 183 gagatttttgcttctgtgccccctctcattgggaagaagaacaatgttagaaaaggctga 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 660 gagatttttgcttctgtgccccctcttgttgggaagaagaacaatgttagaaaaagctga 601
Query: 243 tttctgcttctgcttccttggagccagcccccaacagagggtgtggacataggagcagca 302
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 600 tttccgcttctgcttccttggagccagcccccaacagagggtgtggacataggcgcagca 541
Query: 303 gtagtaggatgccttcccagactgtgtaaatccagcctttcacttggcctgtgcctgtgg 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtagtgggatgccttcccagactgtgtaaatccagcctttcacttggcctgtgcctgtgg 481
Query: 363 cagccacagaatgcttcacatcccaa-------catgtaatattagagcatcaactttcc 415
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 480 cagccacagaatgcttcacatcccaacaactaccatgtgatattagagcatcaactttcc 421
Query: 416 ctaagcttcactcttctcttatgtataatgatacaacatg-aagaattatcatacaactc 474
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 420 ctaagcttcactcttctcttatgtataatgatacaacatgtaagaatgatcatacaactc 361
Query: 475 taatgtgtctcatgcatgcctggcccatatcagatgcttaaggaatgttcagtttccatg 534
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 360 taatgtgtctcatgcatgcctggcccatatcagatgcttaaggaatgctcagtttccatg 301
Query: 535 gtttttaaaaatttcctccaaagtccagatttacggaagttttattgataacatggtttg 594
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 300 gtttctaaaaatttcctccaaagtccagatttacggaagttttatcgataacatggtttg 241
Query: 595 a--atatgtcacttccacccctctgccttgcacccac 629
| |||||||||||||||||||| |||||||||||||
Sbjct: 240 aatatatgtcacttccacccctccgccttgcacccac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1036
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1026
Effective search space: 635094
Effective search space used: 635094
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_g14.g1 MSMg01no152_g14.g1 CHROMAT_FILE:
MSMg01no152_g14.g1 PHD_FILE: MSMg01no152_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:30 2005
(605 letters)
>mm_chr2_102678642_102679645
Length = 1004
Score = 1094 bits (566), Expect = 0.0
Identities = 587/594 (98%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 1 acacgctttgcagagcagggtgaatcccaatgcttaatcatgcagacaaaggaatcatgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacgctttgcagagcagggtgaatcccaatgcttaatcatgcagacaaaggaatcatgt 260
Query: 61 actggagcttgcagagacatgttatcatccagcatccttcagagatgataggatttaagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 actggagcttgcagagacatgttatcatccagcatccttcagagatgata-gatttaagc 319
Query: 121 ctgattcccactaccccacagttgcagaatagagaagatggcttatttgtaaatgtgatt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgattcctactaccccacagttgcagaatagagaagatggcttatttgtaaatgtgatt 379
Query: 181 aaacagtagtatatttgaggagatatgtaagagacaggtaggaacaaaagatttgatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaacagtagtatatttgaggagatatgtaagagacaggtaggaacaaaagatttgatgac 439
Query: 241 atcacataggtgtcttttttattgtaatgtatggatctagtcccccaactataggttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcacataggtgtcttttttattgtaatgtatggatctagtcccccaactataggttttt 499
Query: 301 tataacatttttataaacctatcgtttcacataaatataagggaaaggcatagtcttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tataacatttttataaacctatcgtttcacataaatataagggaaaggcatagtcttgtt 559
Query: 361 atttagtgaatgggttttacaaagcagaaagaggattttaattggataggagctctgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttagtgaatgggttttacaaagcagaaagaggattttaattggataggagctctgtca 619
Query: 421 ttatctcactgatacctcaaatgaaatatgaaagacactcttaatagactatttcctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttatctcactgatacctcaaatgaaatatgaaagacactcttaatagactatttcctttg 679
Query: 481 tgtgcttctagctatgcctggctaggtagctttttaggagcatttagattctggatctgt 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtgcttctatctatgcctggctaggtagctttttaggagcatttagattctggatctgt 739
Query: 541 gtttacttcaacatgatgtattaagaaatagaccacttccttcagcgttttttt 594
||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 740 gtttacttcaacatgatgtattaagaaatagactacctccttcagtgttttttt 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space: 591430
Effective search space used: 591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
