Query= MSMg01no153_o03.b1 MSMg01no153_o03.b1 CHROMAT_FILE:
MSMg01no153_o03.b1 PHD_FILE: MSMg01no153_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:22 2005
(661 letters)
>mm_chr2_72608620_72609680
Length = 1061
Score = 1147 bits (593), Expect = 0.0
Identities = 631/657 (96%), Gaps = 23/657 (3%)
Strand = Plus / Plus
Query: 5 gaattcaagcaggaacccggaggtaagaattgaagctgagaccatggaggaacgctgctt 64
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaatccaagcaggaacctggaggtaagaattgaagctgagaccatggaggaacgctgctt 265
Query: 65 actggactgctcccttaggctcttgttaagctagtcatccgaggattgctgtccagggct 124
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 266 actggactgctccc-taggctcttgctaagctagtcatccgaggattgctgtccagggct 324
Query: 125 gatgtcactcacaagtgggctgggccctctcacatcaatcactaaaaagaagaaaattcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatgtcactcacaagtgggctgggccctctcacatcaatcactaaaaagaagaaaattcc 384
Query: 185 tctatgccagtctgatggaggcattttctcagctgaggttttgccttcctagatgaccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctatgccagtctgatggaggcattttctcagctgaggttttgccttcctagatgaccct 444
Query: 245 tgtgtagcattgacataaaacagtcagcacagtgatgctgaacatctttcatttatctac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtgtagcattgacataaaacagtcagcacagtgatgctgaacatctttcatttatctac 504
Query: 305 tggctacttgagtgtcttgttttgaggaatttctattaaatcctatgaacttttatttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggctacttgagtgtcttgttttgaggaatttctattaaatcctatgaacttttatttgt 564
Query: 365 ttgttcatttattgtgatggccccatatatggttggcaagtgctctcggtgaactgcatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgttcatttattgtgatggccccatatatggttggcaagtgctctcggtgaactgcatc 624
Query: 425 cctagcctatggccacttttaaacatgagatgtttggcacgctttgctcttgagtctttt 484
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 625 cctagcctatggccacttttaaacatgagatgtttg--------------------tttt 664
Query: 485 gacctccttatattcagactgcttacatagtttgactattgatctatgagctgaaatact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gacctccttatattcagactgcttacatagtttgactattgatctatgagctgaaatact 724
Query: 545 gcccccccccaaaaaaaaagccattcccatgttaaacatcttaccaggccaattgactga 604
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gcccccccccaaaaaaa--gccattcccatgttaaacatcttaccaggccaattgactga 782
Query: 605 ttagaactttaatgcttgtggagagtcagcaaacagcagattctggccaaattattt 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ttagaactttaatgcttgtggagagtcagcaaacagcagattctggccaaattattt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_o03.g1 MSMg01no153_o03.g1 CHROMAT_FILE:
MSMg01no153_o03.g1 PHD_FILE: MSMg01no153_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:22 2005
(454 letters)
>mm_chr2_72764728_72765581
Length = 854
Score = 549 bits (284), Expect = e-160
Identities = 303/318 (95%), Gaps = 14/318 (4%)
Strand = Plus / Minus
Query: 1 cagaaattcccttgccgtgcaaaaggtgctaagggctagacagggactgctgaaaccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cagaaattcccttgccgtgcaaaaggtgctaagggctagacagggactgctgaaaccaga 259
Query: 61 tcagggtccataggtggattcctgataagtgggagatgctgctgctgataaagaactg-- 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcagggtccataggtggattcctgataagtgggagatgctgctgctgataaagaactggt 199
Query: 119 ------------gtgtgtgtgtgtgtgtgtgtgtgtgtgagggcactctggttgctgagg 166
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggcactctggttgctgagg 139
Query: 167 caagagttttcatattctaggccagcatggtgtcacagagttcaaggccatcctgggata 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 caagagttttcatattctaggccagcatggtgtcacagagttcaaggccatcctgggata 79
Query: 227 ttagagggatattatatgtgtgtaatactaaaatagtcaggaaagcttgcatgtctattt 286
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 78 ttagagggatattatatgtgtgtaatactaaaatagtcaggaaagtttgcatgtctattt 19
Query: 287 tgtttaatactatttcct 304
||||||||||||||||||
Sbjct: 18 tgtttaatactatttcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
