XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTC
CTTCCTACACTGATCCATGCATTGTAGGGAGGCCGCTTACTGAGAGTCAA
TTCATAACGAGCCTTCATGTCTTCTCATTCCTGACTTATCCGCTTCTTGT
GGACCGCAGAGTTATCCCCACCCTGCTCACCCATCCCAACCCCCCCCCCA
CTTCCCTTGTAAGGCGCCACCACTACAAGCTGCTTCATAGTTTTCCTATC
TTCTGACATCCACAGGTCATTTTCGACACTGTTTGCCAAGGATGCAAAAG
CTGTCACGGCTCTGGATTCTGCCTCCTCACCAGCTCATCCCCCTCCCGCC
CGCCACTCTTCGATAACTTCACGCTACAGTGACCCTGACTTGCTTGTAGG
TCTCCTAGCATACCATGACATTTCACACTTCCCTGCACTTGCACACACTG
TTCCTTCCTTCTGGAATGCTCTTCACCTATGTGACCTTGGAGGCCCTTCT
TCTGTTCAGACCTTGAATCTTTTGAATAGATTTCCTTGGGCGCACAACTG
GAAGTGCTACTCTGCAGATAACATCATTCCTTCTAAATCCCCTAGATTTA
CGTTTACAAAGCCTTGGAGAAATTTGTGATATGCTCATTTCTCCCCTAGA
AGAGTCCCACGCGAGGTCTAAGGCCCGTTGCCCGACGCTAATGGTGCTAG
GGGTATGCTGAGACCGATCTCACTCC

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCACTTCCTTGACATTCCTGGCTTCTAACAGTACCCACTT
TCCTGGGCATGTACTCCCTTCTTCCTCTCTCAAAGCCAGCAGTAGAGGGT
AAGTCCCTTCGCAACACTTGCTCCAGTGACCTTCTCTTTGGAGTTTGTGG
ACCCTCATGATTGCACTGGGCTCACACACACAAAGCAGGGAAGTCCTTTT
CTAAAGTTGGCAGATCAGCACCCTGAATGTGTCTGCAGCGCCATGCCTCT
TATCCATATAAGGTAACACATTCACAGACACCAGGGATTAGAGAATGAAC
AGCTTTGAAGAACCATTACCCAATATCCCCTGGTACAGGTTTCTTTGTGG
GTCTCAATTAGGGGAAAGGGAAGGCAGGTCAAAGGGAGAAAATGGACATC
AAACAATGGTCATTATTTTTAAAGACTTATGAGCGTTCATGACATTGTTC
TGCATTTCACATTTAAGGGTATCTATGGATATGAGGTCAGTTGGTTCTCC
GGGCAGAGGGGAAGACTATAATCAAACATACGATCATAAAGCAAGCTGGA
TGTTTGTCCCCTAAAAGAGATTCAATAATACATAGAAAATATTTTATTCA
TCTTTCTTTGCCTGAGCCCAAAGCATCATACTTACAGATAGTAGCAAATG
TTTGTTTAGTACAGAGCAATAC

Query= MSMg01no153_o16.g1 MSMg01no153_o16.g1 CHROMAT_FILE:
MSMg01no153_o16.g1 PHD_FILE: MSMg01no153_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:24 2005
         (629 letters)



>mm_chr2_48428144_48429172
          Length = 1029

 Score = 1143 bits (591), Expect = 0.0
 Identities = 621/631 (98%), Gaps = 2/631 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacttccttgacattcctggcttctaa-cagtacccactttcctgggcatgtactccctt 59
           |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 199 cactaccttgacattcctggcttctaaacagtacccactttcctgggcatgtactccctt 258

                                                                       
Query: 60  cttcctctctcaaagccagcagtagagggtaagtcccttcgcaacacttgctccagtgac 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cttcctctctcaaagccagcagtagagggtaagtcccttcgcaacacttgctccagtgac 318

                                                                       
Query: 120 cttctctttggagtttgtggaccctcatgattgcactgggctcacacacacaaagcaggg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttctctttggagtttgtggaccctcatgattgcactgggctcacacacacaaagcaggg 378

                                                                       
Query: 180 aagtccttttctaaagttggcagatcagcaccctgaatgtgtctgcagcgccatgcctct 239
           |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 379 aagtccttttctaaagttggcaaatcagcaccctgaatgtgtctgcagcgtcatgcctct 438

                                                                       
Query: 240 tatccatataaggtaacacattcacagacaccaggg-attagagaatgaacagctttgaa 298
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 439 tatccatataaggtaacacattcacagacaccaggggattagagaatgaacagctttgaa 498

                                                                       
Query: 299 gaaccattacccaatatcccctggtacaggtttctttgtgggtctcaattaggggaaagg 358
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaaccattaccctatatcccctggtacaggtttctttgtgggtctcaattaggggaaagg 558

                                                                       
Query: 359 gaaggcaggtcaaagggagaaaatggacatcaaacaatggtcattatttttaaagactta 418
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 gaaggcaggtcaaagggagaaaatggacatcaaacaatggtcactatttttaaagactta 618

                                                                       
Query: 419 tgagcgttcatgacattgttctgcatttcacatttaagggtatctatggatatgaggtca 478
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 619 tgagcgttcatgacattgttctgcatttcatatttaagggtatctatggatatgaggtca 678

                                                                       
Query: 479 gttggttctccgggcagaggggaagactataatcaaacatacgatcataaagcaagctgg 538
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttggttctctgggcagaggggaagactataatcaaacatacgatcataaagcaagctgg 738

                                                                       
Query: 539 atgtttgtcccctaaaagagattcaataatacatagaaaatattttattcatctttcttt 598
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgtttgtcccctaaaagagatccaataatacatagaaaatattttattcatctttcttt 798

                                          
Query: 599 gcctgagcccaaagcatcatacttacagata 629
           |||||||||||||||||||||||||||||||
Sbjct: 799 gcctgagcccaaagcatcatacttacagata 829


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)