Query= MSMg01no155_e06.b1 MSMg01no155_e06.b1 CHROMAT_FILE:
MSMg01no155_e06.b1 PHD_FILE: MSMg01no155_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:08 2005
(213 letters)
>mm_chr2_20806717_20807327
Length = 611
Score = 369 bits (191), Expect = e-107
Identities = 205/211 (97%), Gaps = 6/211 (2%)
Strand = Plus / Plus
Query: 5 gaattctccagcca-t-tcctataactgcaaagatcctatcaagcaacatttatcactat 62
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccagccagtat--tataactgcaaagatcctatcaagcaacatttatcactat 262
Query: 63 gaacaatttggatcttcaatagaggtaccatgactaagaccagccaaagagacctgcaat 122
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 263 gaacaatttggatcttcaatagaggtaccatgactaagaccagcca--gagacctgcaat 320
Query: 123 aactttccagagtagtttataacaatcacacctaaatcacttagcatgcctattattatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactttccagagtagtttataacaatcacacctaaatcacttagcatgcctattattatt 380
Query: 183 aaatagttacaaaaagataagaagaaagaaa 213
|||||||||||||||||||||||||||||||
Sbjct: 381 aaatagttacaaaaagataagaagaaagaaa 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 611
Length adjustment: 9
Effective length of query: 204
Effective length of database: 602
Effective search space: 122808
Effective search space used: 122808
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no155_e06.g1 MSMg01no155_e06.g1 CHROMAT_FILE:
MSMg01no155_e06.g1 PHD_FILE: MSMg01no155_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:08 2005
(285 letters)
>mm_chr2_21003408_21004096
Length = 689
Score = 462 bits (239), Expect = e-135
Identities = 275/289 (95%), Gaps = 4/289 (1%)
Strand = Plus / Minus
Query: 1 catacattgaagggttaatgtaaatggaatcctacaatattctctcttcacaccatgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 catacattgaagggttaatgtaaatggaatcctacaatattctctcttcacaccatgaga 545
Query: 61 tgctgggcattgattccgaggccacacacatacgaggcaactctaccactgaacttttta 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 544 tgctgggcattgattccgaggccacacacatacgagtcaactctaccactgaacttttta 485
Query: 121 ttttgagacaagatctcataaagttctccaggatcacaaatttgaggcatgcctaatgct 180
||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 484 ttttgagacaagacctcacaaagttctccaggatcacaaattcgaggcatgcctaatgct 425
Query: 181 gtttaccagttgataaatacctacttggatctatttatgaatgtgcacaaaatacactac 240
|||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| |
Sbjct: 424 gtttaccagttgataaatacaaacttggatctatttatgaatgtgtaaaaaatacactgc 365
Query: 241 atttgagct----ctttttcaccctatatgtacttctcaaggttttcac 285
||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 364 attagagctaactctttttcaccctatatgtacttctcaaggttttcac 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 689
Length adjustment: 9
Effective length of query: 276
Effective length of database: 680
Effective search space: 187680
Effective search space used: 187680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
