Query= MSMg01no156_a19.b1 MSMg01no156_a19.b1 CHROMAT_FILE:
MSMg01no156_a19.b1 PHD_FILE: MSMg01no156_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:05 2005
(313 letters)
>mm_chr2_83627120_83627831
Length = 712
Score = 559 bits (289), Expect = e-164
Identities = 304/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccttggcatacttattgatttggtaacttgacatatgtcaagcttcatagaac 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaattcaccttggcaaacttattgatttggtaacttgacatatgtcaagcttcatagaac 330
Query: 65 attagaaaattttcacgttttacttttcttttgaagaacagagattaataaagtatcaga 124
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 329 attagaaaattttca-gttttacttttcatttgaagaacagagattaataaagtatcaga 271
Query: 125 aatggctcattcctaaattataatattgcataaaaatcatctaggccttatgttcctatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatggctcattcctaaattataatattgcataaaaatcatctaggccttatgttcctatc 211
Query: 185 tgtaaagttttgttgtttttgttttgttttgttttaatggggacttaggatgtggaggca 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 210 tgtaaagttttgttgtttttgttttgttttgttttaaaggggacttaggatgtggaggca 151
Query: 245 ggaggattatgaatccaaggtcattttcagctactaagcatggttcaaggccaacctaga 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 150 ggaggattatgaatccaaggtcattttcagctacaaagcatggttcaaggccaacctaga 91
Query: 305 caacaggta 313
|||||||||
Sbjct: 90 caacaggta 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_a19.g1 MSMg01no156_a19.g1 CHROMAT_FILE:
MSMg01no156_a19.g1 PHD_FILE: MSMg01no156_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:05 2005
(283 letters)
>mm_chr2_83480566_83481248
Length = 683
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%)
Strand = Plus / Plus
Query: 1 acagacctccctgccaccgtgtcccaaagactgggatgagagtccttccccaccacatct 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acagacctccctgccaccgtgtcccaaagactgggatgagagtccttttccaccacatct 260
Query: 61 ggccacaccattcatgtttatgaacacacttacggagctctaagagacaaggtgcagtag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ggccacaccattcatgtttatgaacacacttatggagctctaagagacaaggtgcagtag 320
Query: 121 gtactattattcatcagtaaagacatcaaggtcttacttaccatagtctaagttgctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtactattattcatcagtaaagacatcaaggtcttacttaccatagtctaagttgctgct 380
Query: 181 ttcatcatatgatcttccatatgaattctttgttaactccactgactcacacttactgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatcatatgatcttccatatgaattctttgttaactccactgactcacacttactgat 440
Query: 241 ccctgatttatgtaattcatcatggttttgtgaaaaaataaga 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgatttatgtaattcatcatggttttgtgaaaaaataaga 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
