Query= MSMg01no156_a24.b1 MSMg01no156_a24.b1 CHROMAT_FILE:
MSMg01no156_a24.b1 PHD_FILE: MSMg01no156_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:06 2005
(319 letters)
>mm_chr2_24149062_24149780
Length = 719
Score = 569 bits (294), Expect = e-166
Identities = 308/314 (98%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 5 gaattctactttgagatgagtcggtaaggagacataaggctggggcctcgtctagtgccc 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctactttgagatgagtcggtaaagagacataaggctggggcctcgtctagtgccc 261
Query: 65 ccagtctgagatcttcttgctcagcatctctggaaagcagaataaggaagataccaaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagtctgagatcttcttgctcagcatctctggaaagcagaataaggaagataccaaaga 321
Query: 125 tgtttgggtcttaatccccagaatctgtgactgtgttacattaaatggcaaagggatttt 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 322 tgtttgggtcttaatccccagaatctgtgaccgtgttacattaaatggcaaagggatttt 381
Query: 185 ttt---ccttcatggtccatttgggcccattggaatcatctgaggcctcatgaggagaag 241
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttttttccttcatggtccatttgggcccattggaatcatctgaggcctcatgaggagaag 441
Query: 242 gaagaggtcagagggagactggggcaaactttggtactaaaagtaacaatggggacaggg 301
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 442 gaagaggtcagagggagactggggcaaactttggtactaaaagtaacaatggagacaggg 501
Query: 302 accataagctgatg 315
||||||||||||||
Sbjct: 502 accataagctgatg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_a24.g1 MSMg01no156_a24.g1 CHROMAT_FILE:
MSMg01no156_a24.g1 PHD_FILE: MSMg01no156_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:06 2005
(547 letters)
>mm_chr2_24308796_24309742
Length = 947
Score = 1019 bits (527), Expect = 0.0
Identities = 542/547 (99%)
Strand = Plus / Minus
Query: 1 cttacaatctctgctccccaccctgctgtatgtaaaatggaggtgctgtgctttctacct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 747 cttacaatctctgctccccaccctgctgtatataaaatggaggtgctgtgctttctacct 688
Query: 61 caagggccgtgaagccaatttaatgaaaagatgcgcttctgcttggctcaggaagaagca 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caagggctgtgaagccaatttaatgaaaagatgcgcttctgcttggctcaggaagaagca 628
Query: 121 tgtttcttgatgttgcttgcagccataattcctaagcagtaactaactcaggaaaggggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtttcttgatgttgcttgcagccataattcctaagcagtaactaactcaggaaaggggg 568
Query: 181 tggatacagagcacaacccacctcccttcttccttctctttcccccttttaaaggccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggatacagagcacaacccacctcccttcttccttctctttcccccttttaaaggccaat 508
Query: 241 attggtaaaacacaggtcacctttgattcatgttcagttattacccttttatccaccatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 attggtaaaacacaggtcacctttgattcatgttcagttattacccttttatccaccatt 448
Query: 301 agtctcctgcatctgcatttatgtcaccccccctccataccagagatgaaatgatagtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtctcctgcatctgcatttatgtcaccccccctccataccagagatgaaatgatagtac 388
Query: 361 taacccttctcagccacaccaccctctgggctaatctcagcaagggtatcttcccctgct 420
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 387 taacccttctcagccacaccaccctctgggctaatctcagccagggcatcttcccctgct 328
Query: 421 tctaggcgaagccttctactcctataaggagataatatttgatctggctgagcttcagac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 327 tctaggcgaagccttctactcctataaggagataatatttgatctggctgagtttcagac 268
Query: 481 catagaagatccagaattgctgttggttctcccaactgccttaacgtttatggagaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catagaagatccagaattgctgttggttctcccaactgccttaacgtttatggagaagca 208
Query: 541 gagcagg 547
|||||||
Sbjct: 207 gagcagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
