Query= MSMg01no156_e23.b1 MSMg01no156_e23.b1 CHROMAT_FILE:
MSMg01no156_e23.b1 PHD_FILE: MSMg01no156_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:24 2005
(313 letters)
>mm_chr2_47115016_47115728
Length = 713
Score = 590 bits (305), Expect = e-173
Identities = 308/309 (99%)
Strand = Plus / Plus
Query: 5 gaattcctttctgactgctaacaatacaatctacctaataagcctttacagattacatag 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttctgactgctaacaatacaaactacctaataagcctttacagattacatag 264
Query: 65 atttctttcattcaccaacatcttggctgtgtattatcctaaattgtatttaataatttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttctttcattcaccaacatcttggctgtgtattatcctaaattgtatttaataatttc 324
Query: 125 atcttttgttagcttctttgtctatgtctggttttattctttggcaaagaggctcacctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcttttgttagcttctttgtctatgtctggttttattctttggcaaagaggctcacctg 384
Query: 185 gaatgtggactcttaatactacagtgtttttagtgataatacattctcctgacttttgag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatgtggactcttaatactacagtgtttttagtgataatacattctcctgacttttgag 444
Query: 245 ttactttattccaactcaaaaacagatgactatagagagaaaatcttttttgtttctatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttactttattccaactcaaaaacagatgactatagagagaaaatcttttttgtttctatg 504
Query: 305 gacgtggta 313
|||||||||
Sbjct: 505 gacgtggta 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_e23.g1 MSMg01no156_e23.g1 CHROMAT_FILE:
MSMg01no156_e23.g1 PHD_FILE: MSMg01no156_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:25 2005
(482 letters)
>mm_chr2_47222635_47223518
Length = 884
Score = 580 bits (300), Expect = e-170
Identities = 342/359 (95%), Gaps = 8/359 (2%)
Strand = Plus / Minus
Query: 128 agttgaaaagtaactaagaattttttattttattattatttatatccaactttttaccct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 884 agttgaaaagtaactaagaattttttattttattattatttatatccaactttataccct 825
Query: 188 tgtttccaaataatatacaacatattattttaagctttataaatacattgagactttctt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tgtttccaaataatatacaacatattattttaagctttataaatacattgagactttctt 765
Query: 248 tgtgtcttaatgcattgttcaatttgaagaaattttcttgttcttctaacaagaaacttg 307
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||
Sbjct: 764 tgtgtcttaatgcattgttcaatttgaagaaattttcttggccttctaagaagaaatttg 705
Query: 308 attgtcaaatgattatgtacaacatatggtcatcttaattcatagtttccctatggggat 367
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 attgtcaaatgattatgtgcaacatatggtcatcttaattcatagtttccctatggggat 645
Query: 368 tttgtcttcaaaacttatattttggtaa----tgcagt-attacagtcagctactatcac 422
|||||||||||||||||||||||||||| || || |||||||||||| ||||||||
Sbjct: 644 tttgtcttcaaaacttatattttggtaatgtttg--gtaattacagtcagccactatcac 587
Query: 423 tgtgttgttctctatctttttttttttttttagnctgatagtgtttcttttaagatgtt 481
|||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||
Sbjct: 586 tgtgttgttctctatc-tttttttttttttaagtctgatagtgtttcttttaagatgtt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 884
Length adjustment: 10
Effective length of query: 472
Effective length of database: 874
Effective search space: 412528
Effective search space used: 412528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
