Query= MSMg01no156_j09.b1 MSMg01no156_j09.b1 CHROMAT_FILE:
MSMg01no156_j09.b1 PHD_FILE: MSMg01no156_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:45 2005
(376 letters)
>mm_chr2_78940136_78940911
Length = 776
Score = 654 bits (338), Expect = 0.0
Identities = 353/358 (98%)
Strand = Plus / Plus
Query: 4 ggaattccttggtgtacaaaaaccaactaaatccaagagtcatgcaagttacggccattt 63
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaatttcttggtgtacaaaaaacaactaaatccaagagtcatgcaagttacggtcattt 263
Query: 64 ggagataaaaaagcctaacccaacagaacacaacacaacaaaacacaacccaacacaacc 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagatagaaaagcctaacccaacagaacacaacacaacaaaacacaacccaacacaacc 323
Query: 124 cagcccacccaagcccaacccaatccagcccaaaacaaccaaacccagcccaaccctccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 324 cagcccacccaagcccaacccaatccagcccaaaacaaccaaacccagcccaatcctccc 383
Query: 184 agtgtccaggttctcaaatgagaggttagtcgctattagagagctttctaaagagaagtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtgtccaggttctcaaatgagaggttagtcgctattagagagctttctaaagagaagtt 443
Query: 244 tacatttgagccagtactgggtctttcaatttgaagacaaagcagtagagaaacctagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacatttgagccagtactgggtctttcaatttgaagacaaagcagtagagaaacctagac 503
Query: 304 ttagaatctctctctctctctctctctctctctctctctctctctctctctctctctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttagaatctctctctctctctctctctctctctctctctctctctctctctctctctc 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_j09.g1 MSMg01no156_j09.g1 CHROMAT_FILE:
MSMg01no156_j09.g1 PHD_FILE: MSMg01no156_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:45 2005
(289 letters)
>mm_chr2_79008034_79008722
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 288/313 (92%), Gaps = 24/313 (7%)
Strand = Plus / Minus
Query: 1 caactatgaccctaaaggaaagaatgtgtgatgctccttctgtgtgcttgatacagtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 caactatgaccctaaaggaaagaatgtgtgatgctccttctgtgtgcttgatacagtgag 582
Query: 61 ctatggtttctgacctccttagcatgagagagagagagagagagagagagagagagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctatggtttctgacctccttagcatgagagagagagagagagagagagagagagagagag 522
Query: 121 agaga-----------------------a-aacagaagaaatggtagaccagaatgattc 156
||||| | | ||||||||||||||||||||||||||||
Sbjct: 521 agagagagagagagagagagagagagagagaccagaagaaatggtagaccagaatgattc 462
Query: 157 aaaggtacaaatacatcttgaatagacatgtctaggaaagtacaaagttaggacataaaa 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaaggtacaaatacatcttgaatagacatgtctaggaaagtacaaagttaggacataaaa 402
Query: 217 atgagtcagagttggctaagtgaagatgggaatggagcagaaagaagctgaaagttatag 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atgagtcagagttggctaagtgaagatgggaatggagcagaaagaagctgaaagttatag 342
Query: 277 gaaaagcacacag 289
|||||||||||||
Sbjct: 341 gaaaagcacacag 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
