Query= MSMg01no158_b23.b1 MSMg01no158_b23.b1 CHROMAT_FILE:
MSMg01no158_b23.b1 PHD_FILE: MSMg01no158_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:36 2005
(285 letters)
>mm_chr2_135948562_135949246
Length = 685
Score = 476 bits (246), Expect = e-139
Identities = 270/278 (97%), Gaps = 3/278 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttcagtgtatgtgttggtattatagtgatgtagagagcagagaaaatggcaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggaattcttcagtgtatgtgttggtattatagtgatgtagagagcagagaaaatggcaaa 301
Query: 64 tagtagaacactttccaattcaagatgaaatctctatttccacgaagttcgcaaaacctt 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 300 tagtagaacactttccaattcaagatgaaatctctatttccatgaagttcgcaaaacctt 241
Query: 124 cctttaaaatattttattctcttagagtttgtgcaaaatgtggcacatgcctttaatccc 183
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 240 cctttaaaatattttattctcttagagtttgtgc-aaat-t-gcacatgcctttaatccc 184
Query: 184 agtatttgggaggcagagacaggcagatttctgagttcgaggccagtctggtgtacagag 243
|| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 183 agcatttgggaggcagaggcaggcagatttctgagttcgaggccagcctggtgtacagag 124
Query: 244 tgagttccaagacagccaaggcctcacagagaaaccct 281
||||||||| ||||||||||||||||||||||||||||
Sbjct: 123 tgagttccaggacagccaaggcctcacagagaaaccct 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_b23.g1 MSMg01no158_b23.g1 CHROMAT_FILE:
MSMg01no158_b23.g1 PHD_FILE: MSMg01no158_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:36 2005
(300 letters)
>mm_chr2_135793347_135794046
Length = 700
Score = 578 bits (299), Expect = e-169
Identities = 299/299 (100%)
Strand = Plus / Plus
Query: 1 ttcctgagctgggatgtaagatgctggttgtgattctgtctgctgcttgctttttgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgagctgggatgtaagatgctggttgtgattctgtctgctgcttgctttttgaggg 260
Query: 61 gtttgatggctgagtttctgagtacatctttgcttgtcttttacagagcgcaatattcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgatggctgagtttctgagtacatctttgcttgtcttttacagagcgcaatattcac 320
Query: 121 tataacatgtcttcttttaacgagtcggttggccttggctacttgaagacgcacgcgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataacatgtcttcttttaacgagtcggttggccttggctacttgaagacgcacgcgatt 380
Query: 181 gagtttgtaaagtatcctaacggactgtatgggatgaatggtgctctcaaggaccggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtttgtaaagtatcctaacggactgtatgggatgaatggtgctctcaaggaccggcag 440
Query: 241 ggatctctgcagtagattggcagtggtctataattttaatatttagctttttgtataat 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatctctgcagtagattggcagtggtctataattttaatatttagctttttgtataat 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
