Query= MSMg01no158_e18.b1 MSMg01no158_e18.b1 CHROMAT_FILE:
MSMg01no158_e18.b1 PHD_FILE: MSMg01no158_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:48 2005
(314 letters)
>mm_chr2_139041118_139041831
Length = 714
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgctgaactcagctaatgtgattttgcttggaatttaaatcaaattgtagtct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgctgaactcagctaatgtgattttgcttggaatttaaatcaaattgtagtct 263
Query: 64 gtgcattaagagatcaaaaagctaatgtatcttaaacctgcctggtctgtctccctcctc 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 gtgcattaagagatcaaaaagctaatgtatcttaaacctgcctggtctgactccctcctc 323
Query: 124 atcttactctctttcaacctggccaatatttgttcaaggtaacagggaaagtcaccattt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcttactctctttcaacctggccaatatttgttcaaggtaacagggaaagtcaccattt 383
Query: 184 tctggatcaggttccttttcctttgtgcattctgtgttttgtgatttgagagacctggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctggatcaggttccttttcctttgtgcattctgtgttttgtgatttgagagacctggaa 443
Query: 244 ttttaaaaccatctcatctttcctctttccccctttactgtaggaaaggctacctactta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttaaaaccatctcatctttcctctttccccctttactgtaggaaaggctacctactta 503
Query: 304 tttcacatctc 314
|||||||||||
Sbjct: 504 tttcacatctc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_e18.g1 MSMg01no158_e18.g1 CHROMAT_FILE:
MSMg01no158_e18.g1 PHD_FILE: MSMg01no158_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:48 2005
(288 letters)
>mm_chr2_139127599_139128285
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 tttctatatgatttcaattcttttaagtgtgtttacatttattctgttgtctagaataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tttctatatgatttcaattcttttaagtgtgtttacatttattctgttgtctagaataca 484
Query: 61 attaaattggacaaggtgaaggtgtccagtttaatttgacaaatattacctagaccttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 attaaattggacaaggtgaaggtgtccagtttaatttgacaaatattacctagaccttga 424
Query: 121 tgcttaatggtattttatttggtattttatgaggtataaaatgaggtattttatatcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgcttaatggtattttatttggtattttatgaggtataaaatgaggtattttatatcttt 364
Query: 181 tttgctctgtttagcttttaaaattgctcaaaagtaaacactgaagtctccatcattagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgctctgtttagcttttaaaattgctcaaaagtaaacactgaagtctccatcattagc 304
Query: 241 catgctgatttgctttcccttcattcctatgggtttttttgcttca 286
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 303 catgctgatttgctttcccttcattcctatggg-ttttttgcttca 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
