Query= MSMg01no159_d01.b1 MSMg01no159_d01.b1 CHROMAT_FILE:
MSMg01no159_d01.b1 PHD_FILE: MSMg01no159_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:52 2005
(315 letters)
>mm_chr2_124565555_124566269
Length = 715
Score = 601 bits (311), Expect = e-176
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 5 gaattcttctggaaactcctggatcagaagaccactctaaggtggaagccatctccttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctggaaactcctggatcagaagaccactctaaggtggaagccatctccttgt 264
Query: 65 gtgcctctggattctaggactaggacagacagagtcacctttgttaccagggaagtgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgcctctggattctaggactaggacagacagagtcacctttgttaccagggaagtgtga 324
Query: 125 agttgccgttcagtgagggaaggcaggcagggaaagcaaaggagaaaggggaagatgtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttgccgttcagtgagggaaggcaggcagggaaagcaaaggagaaaggggaagatgtct 384
Query: 185 gttctctgataagaagttagaatatgaaggctgaagggtaaggaactgcaacaagcccta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttctctgataagaagttagaatatgaaggctgaagggtaaggaactgcaacaagcccta 444
Query: 245 ggggtttgttgcatgtactcctgtggagggtcctgccaacctaggtaactggagagatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggtttgttgcatgtactcctgtggagggtcctgccaacctaggtaactggagagatca 504
Query: 305 tctcgtgaggt 315
|||||||||||
Sbjct: 505 tctcgtgaggt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_d01.g1 MSMg01no159_d01.g1 CHROMAT_FILE:
MSMg01no159_d01.g1 PHD_FILE: MSMg01no159_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:52 2005
(284 letters)
>mm_chr2_124716541_124717224
Length = 684
Score = 426 bits (220), Expect = e-123
Identities = 226/228 (99%)
Strand = Plus / Minus
Query: 57 agaaaagaggggctacttgtcagttatggaagccagcaatacatgcaacagcacagcttt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agaaaagaggggctacttgtcagttatggaagccagcaatacatgcaacagcacagcttt 363
Query: 117 tcctttaaatcatctgtgggactgccaaacactggccacgcctcttatccaatccactag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcctttaaatcatctgtgggactgccaaacactggccacgcctcttatccaatccactag 303
Query: 177 gtgggttctagggccttcagagcaaccttgcagaaggcctctgggcttgttttgagacag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtgggttctagggccttcagagcaaccttgcagaaggcctctgggcttgttttgagacag 243
Query: 237 agtctcaccaggttactctggcagtcctggaacttcctatagagacta 284
||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 242 agtctcaccaggttactctggcagtcctgaaacttcctatggagacta 195
Score = 136 bits (70), Expect = 2e-36
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 1 tcgcagcagctccttgaaggttgttcctattattagggtttatgaaaaggaagcttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcgcagcagctccttgaaggttgttcctattattagggtttatgaaaaggaagcttagaa 623
Query: 61 aagaggggct 70
||||||||||
Sbjct: 622 aagaggggct 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
