Query= MSMg01no159_i24.b1 MSMg01no159_i24.b1 CHROMAT_FILE:
MSMg01no159_i24.b1 PHD_FILE: MSMg01no159_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:19 2005
(322 letters)
>mm_chr2_101775469_101776188
Length = 720
Score = 499 bits (258), Expect = e-145
Identities = 299/313 (95%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 6 aattcccctggcctccaacttctgtcttcattgaaagtcctctttctctgttttcttttc 65
||||||||||||||||| | |||||||||| |||||||||||||||||||||||| ||||
Sbjct: 516 aattcccctggcctccaccctctgtcttcactgaaagtcctctttctctgttttcctttc 457
Query: 66 ttccccttcctgtatttaggcctccaccctctccacaccccccatcccttgcttgatgag 125
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 456 ctccccttcctgtatttaggcctccaccctccccaca-cccccatcccttgcttgatgaa 398
Query: 126 tttttaagacaagatggtttgtgctctttagagcaggcaaggtagctaagtgtcctcaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tttttaagacaagatggtttgtgctctttagagcaggcaaggtagctaagtgtcctcaga 338
Query: 186 gttcatcacgtgatccatttcctctcctaaaaatctatcgataggttgagaactgaggag 245
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 gttcatcacgtggtccattttctctcctaaaaatctatcgataggttgagaattgaggag 278
Query: 246 ttattctgagaggccctctgtctggtgtgaattaatagctattttttttgtttgttttgt 305
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 277 ttattctgagaggccctctgtctggtgtgaattaatagcta-tttttttgtttgttttgt 219
Query: 306 gcagggnattttg 318
|||| | ||||||
Sbjct: 218 gcagtgtattttg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 720
Length adjustment: 9
Effective length of query: 313
Effective length of database: 711
Effective search space: 222543
Effective search space used: 222543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_i24.g1 MSMg01no159_i24.g1 CHROMAT_FILE:
MSMg01no159_i24.g1 PHD_FILE: MSMg01no159_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:19 2005
(287 letters)
>mm_chr2_101605605_101606291
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Plus
Query: 1 agacaggaaggcatgcagcctgagccagcaccgtggacagtgaagactggcaatctggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacaggaaggcatgcagcctgagccagcaccgtggacagtgaagactggcaatctggcc 260
Query: 61 aaaatccttctcttcagaaaggtcacctccttgcctttggagatattgtgtcatgttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatccttctcttcagaaaggtcacctccttgcctttggagatattgtgtcatgttctg 320
Query: 121 cttcctaaggcagttacaaatagaaaagattctgatttatggttttcatattgacaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcctaaggcagttacaaatagaaaagattctgatttatggttttcatattgacaaaac 380
Query: 181 aggtgccttgactttcatatggaggaaaactggccactctgttttagatggacttgctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtgccttgactttcatatggaggaaaactggccactctgttttagatggacttgctcc 440
Query: 241 taaggtctggaagtacttgtctatgaattcaatattatgttttagaa 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaggtctggaagtacttgtctatgaattcaatattatgttttagaa 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
