Query= MSMg01no161_a08.b1 MSMg01no161_a08.b1 CHROMAT_FILE:
MSMg01no161_a08.b1 PHD_FILE: MSMg01no161_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:09 2005
(424 letters)
>mm_chr2_137353700_137354523
Length = 824
Score = 704 bits (364), Expect = 0.0
Identities = 403/434 (92%), Gaps = 29/434 (6%)
Strand = Plus / Plus
Query: 16 gaattctttacaaactaaatttctcttgaaaaaaaa--tcttggt--------------- 58
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 187 gaattctttacaaactaaatttctcttgaaaaaaaaaatcttggttctttcttaagaacg 246
Query: 59 ------------gtagaatataggttaggtcctaagtgtttgctgtctgagaacagtgga 106
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttccccagctgtgtagaatataggttaggtcctaagtgtttgctgtctgagaacagtgga 306
Query: 107 agcacccactgcctcccacattgtacaccccttcacagagggaatcactcagcatgtatt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcacccactgcctcccacattgtacaccccttcacagagggaatcactcagcatgtatt 366
Query: 167 acattatcatataattttcctcctcctttcatctttttatggtgagtggcttcctctcct 226
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 367 acattatcatataattttcctactcctttcatctttttatggtgagtggcttcctctcct 426
Query: 227 ctatatactaatatcacatctcttgataacgacagacatcactagccttttccctgtggt 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctatatactaatatcacatctcttgataacgacagacatcactagccttttccctgtggt 486
Query: 287 ttagggcatgcctctactggtttagtagtatgatgctagcttctggacctaaagaatttt 346
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 ttagggcatgcctctactggtttagtagtatgatgctagcttctggacctaaggaatttt 546
Query: 347 ctttctcaggtctagaggacatctttccattgtgaggctgcacagcgtgttttttgggat 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctttctcaggtctagaggacatctttccattgtgaggctgcacagcgtgttttttgggat 606
Query: 407 aatgtgattctgtc 420
||||||||||||||
Sbjct: 607 aatgtgattctgtc 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_a08.g1 MSMg01no161_a08.g1 CHROMAT_FILE:
MSMg01no161_a08.g1 PHD_FILE: MSMg01no161_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:09 2005
(382 letters)
>mm_chr2_137399759_137400541
Length = 783
Score = 731 bits (378), Expect = 0.0
Identities = 381/382 (99%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 attgaggaatccagaaaactaaaggcactttaaaattgaagacatactgtgtatgaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 attgaggaatccagaaaactaaaggcactttaaaattgaagacatactgtgtatgaaaac 523
Query: 61 agatgtgtgaaaacctataaagtaaccagttcaccaaatactacttgcctactttctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agatgtgtgaaaacctataaagtaaccagttcaccaaatactacttgcctactttctgtg 463
Query: 121 tgcccagaccctacctgttctaagttggggattcaaaagtaagtagaggagaaaataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgcccagaccctacctgttctaagttggggattcaaaagtaagtagaggagaaaataaag 403
Query: 181 attcctctgaagagcttctgtttctgcagggtaggcctgtgattaaataagaaattaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 attcctctgaagagcttctgtttctgcagggtaggcctgtgattaaataagaaattaaaa 343
Query: 241 tgaggtaaagtattatgaacattatgagaaatagtaaagattcctcagggtatgagagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgaggtaaagtattatgaacattatgagaaatagtaaagattcctcagggtatgagagta 283
Query: 301 agaggcaagtgtatcctgggggaagaagttctatctaa-ccaaagcccagggtgaggtag 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 282 agaggcaagtgtatcctgggggaagaagttctatctaaaccaaagcccagggtgaggtag 223
Query: 360 atatgatttatacaagcaataa 381
||||||||||||||||||||||
Sbjct: 222 atatgatttatacaagcaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 783
Length adjustment: 9
Effective length of query: 373
Effective length of database: 774
Effective search space: 288702
Effective search space used: 288702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
