Query= MSMg01no161_o15.b1 MSMg01no161_o15.b1 CHROMAT_FILE:
MSMg01no161_o15.b1 PHD_FILE: MSMg01no161_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:04 2005
(423 letters)
>mm_chr2_112746162_112746985
Length = 824
Score = 762 bits (394), Expect = 0.0
Identities = 403/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 15 ggaatt-atcttgtcccatcacaccacctcctattggcttagaatctagtctgtatgtaa 73
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaattcatcttgtcccatcacaccacctcctattggcttagaatctagtctgtatgtaa 561
Query: 74 gtagagcacagtttcaggtccacttcctttctatccttttttagttgttagctgggtcac 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtagagcacagtttcaggtccacttcctttctatccttttttagttgttagctgggtcac 501
Query: 134 tgtggagaaagcattgcttctcatatgaagctttacctcatctccaatcaaaagttgtag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtggagaaagcattgcttctcatatgaagctttacctcatctccaatcaaaagttgtag 441
Query: 194 ggaaagaacacaatctttgtgaagatgagagaagtgggttgtaggatccactccatcctt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaagaacacaatctttgtgaagatgagagaagtgggttgtaggatccactccatcctt 381
Query: 254 tttgaatgcactcttcccattgacctccgaaggactgcattcttacagatcctcatcagc 313
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 tttgaatgcactcttcccattgacctcccaaggactgcattcttacagatcctcatcagc 321
Query: 314 acctctcacttgcagcatctccaggacctatcagcattcttccattgccaattaaaaagt 373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acctctcacttgcagcatctccaggacctatcagcattcttccattgccaattaaaaagc 261
Query: 374 aacattaaaacttttaacgcactcttcaaagcttaagctaaatgcc 419
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacattaaaacttttaacgcactcttcaaagcttaagctaaatgcc 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_o15.g1 MSMg01no161_o15.g1 CHROMAT_FILE:
MSMg01no161_o15.g1 PHD_FILE: MSMg01no161_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:04 2005
(382 letters)
>mm_chr2_112611722_112612499
Length = 778
Score = 569 bits (294), Expect = e-166
Identities = 321/332 (96%), Gaps = 5/332 (1%)
Strand = Plus / Plus
Query: 1 ccaagcacagctgcacatcactaataggatcaattactcaaggagcagccatgctagagc 60
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 202 ccaagcacagctgcacat-actaataggatcaattactcaaggagcagtcatgctagagc 260
Query: 61 ccggattctatccctcaggattttgaatcctggggctgggatatgggaactgggatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccggattctatccctcaggattttgaatcctggggctgggatatgggaactgggatattt 320
Query: 121 atctaggatctcagaaagtgattctaattcacagcctggcagggaaactgctgggttaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 atctaggatctcagaaagtgattctaattcacagcctggcagggaaactgctggattaaa 380
Query: 181 gcagcaggatgggatcctagcccatggtgtgataccagttactcaaaagcatctcaccct 240
|||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 381 gcagcaggttgggatcctagcccatggtgtgataccagctactcaaaagcatcacaccct 440
Query: 241 ttgtccttgcagacgcgttggttgcagattcccaaggctctttgctgcccttgatacctg 300
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ttgtccttgcagacgcgttg----cagattcccaaggctctttgctgcccttgatgcctg 496
Query: 301 tgtccattggcaaaagctactgtctccccccc 332
||||||||||||||||||||||||||||||||
Sbjct: 497 tgtccattggcaaaagctactgtctccccccc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 778
Length adjustment: 9
Effective length of query: 373
Effective length of database: 769
Effective search space: 286837
Effective search space used: 286837
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
