Query= MSMg01no162_c10.b1 MSMg01no162_c10.b1 CHROMAT_FILE:
MSMg01no162_c10.b1 PHD_FILE: MSMg01no162_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:27 2005
(288 letters)
>mm_chr2_118212643_118213333
Length = 691
Score = 520 bits (269), Expect = e-152
Identities = 283/289 (97%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 1 gaagatatttgttgagtgctgcc---tttttttttttttcagctctcacattcaacccgt 57
||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||
Sbjct: 489 gaagatatttgttgagtgctgccttttttttttttttttcagctctcacattcaaactgt 430
Query: 58 catcatgtcctcagtttccccctaagctgcagcccatttttaccacctcttcactggctc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 catcatgtcctcagtttccccctaagctgcagcccatttttaccacctcttcactggctc 370
Query: 118 tctattcggccgtcttcatccttgccccatgttaagcagctcttcctattgtagccaaag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tctattcggccgtcttcatccttgccccatgttaagcagctcttcctattgtagccaaag 310
Query: 178 taaagttcctaaatcacgaatatggccacactaatctctaaaatccttccagtttccaac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taaagttcctaaatcacgaatatggccacactaatctctaaaatccttccagtttccaac 250
Query: 238 tgctcttcttctattacaaaagaaaaactcaatacggatttttttcaac 286
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 249 tgctcttcttctactacaaaagaaaaactcaatacggatttttttcaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 691
Length adjustment: 9
Effective length of query: 279
Effective length of database: 682
Effective search space: 190278
Effective search space used: 190278
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no162_c10.g1 MSMg01no162_c10.g1 CHROMAT_FILE:
MSMg01no162_c10.g1 PHD_FILE: MSMg01no162_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:27 2005
(279 letters)
>mm_chr2_118054405_118055083
Length = 679
Score = 491 bits (254), Expect = e-143
Identities = 272/278 (97%)
Strand = Plus / Plus
Query: 1 taatgctaagtgtttgtgctcaacaaaagattagagcccattcactcaccaactacacgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 taatgctaagtgtttgtgctcaacaaaagattagagcccattcactcaccaactactcgg 260
Query: 61 agataatgcatttatgaattcatttcagtgtgcttattcagaagacatcacaatccaaaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agataacgcatttatgaattcatttcagtgtgcttattcagaagacatcacaatccaaaa 320
Query: 121 ccaattaccatgaaatattttgccaggcttgcatttctacttgaaaattcagtgtgcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ccaattaccatgaaatattttgccaggcttgcatttctacttgaaaatttagtgtgcagt 380
Query: 181 gctgttttgggctagacgcttcaagaagaaactgaaaatacgaatccaaatgataggttg 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 gctgttttgggctagacgcttgaagaagaaactgaaaatacgaatccaaatgataggctg 440
Query: 241 ttttgcatggaaaaaagaacattaatttcttcttttca 278
||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ttttgcatggaaaaaagaagattaatttcttcttttca 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
