Query= MSMg01no162_f13.b1 MSMg01no162_f13.b1 CHROMAT_FILE:
MSMg01no162_f13.b1 PHD_FILE: MSMg01no162_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:41 2005
(317 letters)
>mm_chr2_170270012_170270727
Length = 716
Score = 590 bits (305), Expect = e-173
Identities = 311/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattccattcctgtccacatggaatatgatcacgtttaccccctttctccagaactccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattcctgtccacatggaatatgatcacgtttaccccctttctccagaactccc 264
Query: 65 cgggcctcttctccagcatgctccactctcaacttcctgccattttttttttccttttct 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 cgggcctcttctccagcatgctccactctcaacttcctgccattttttttt-ccttttct 323
Query: 125 ataaacacagcaggtccagctaggacttcccatttgtgttcgggaagccaaccagcagcc 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataaacacagcaggtccagttaggacttcccatttgtgttcgggaagccaaccagcagcc 383
Query: 185 acatgttcaaaaactaaagatgctccctccctttctaatggcttctcagtaaaggatggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acatgttcaaaaactaaagatgctccctccctttctaatggcttctcagtaaaggatggg 443
Query: 245 tgtcttgtaggtcacctacccgcgctgtgctgggattctggccagcttggttttgtgctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtcttgtaggtcacctacccgcgctgtgctgggattctggccagcttggttttgtgctg 503
Query: 305 gcaaccacagctg 317
|||||||||||||
Sbjct: 504 gcaaccacagctg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_f13.g1 MSMg01no162_f13.g1 CHROMAT_FILE:
MSMg01no162_f13.g1 PHD_FILE: MSMg01no162_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:42 2005
(288 letters)
>mm_chr2_170353007_170353694
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 1 ttgcatacgtcccacccgaccaatcagaattcttgcatgagtcccaacatggcaacagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttgcatacgtcccacccgaccaatcagaattcttgcatgagtcccaacatggcaacagct 426
Query: 61 gcccaaagccaagaggttgtttcctcttggtgatgggctgggttacctcgttacagccat 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 425 gcccaaagccaagaggttgtttcctcctggtgatgggctgggttacctcgttacagccat 366
Query: 121 ctctccaaatgccaagggtctaaacaagaatgcttttagcttaaaacaaaaccccctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctctccaaatgccaagggtctaaacaagaatgcttttagcttaaaacaaaaccccctctt 306
Query: 181 ttatagaagccagaaacttagttactaagtccatagagaaggtataaactatggtgacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttatagaagccagaaacttagttactaagtccatagagaaggtataaactatggtgacct 246
Query: 241 agaaattttggtcacctacaagtcccatagctatcacttattgta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agaaattttggtcacctacaagtcccatagctatcacttattgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
