Query= MSMg01no163_i12.b1 MSMg01no163_i12.b1 CHROMAT_FILE:
MSMg01no163_i12.b1 PHD_FILE: MSMg01no163_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:08 2005
(314 letters)
>mm_chr2_159273825_159274538
Length = 714
Score = 516 bits (267), Expect = e-151
Identities = 300/311 (96%), Gaps = 2/311 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcctatctaacctcgatatgtgtcaaagtgagcagcatattgaatagatgcc 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggaattctgcctatctaaccccgatatgtgtcaaagtgagcagcatattgaatagatgcc 306
Query: 64 ttcctgaaacaaaccagagaccacagaagcagcagcaggaatgactgcatggttcccttc 123
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 305 ttcctgaaacaaaccagagaccacagaagcagcagcaagaatgactgcatggttcccttc 246
Query: 124 agggaacagggaatacaggaaatagggcccctggtaagctcaagctaaagcttgaagccc 183
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 245 agggaacagggcatacaggaaatagggcccctggtatgctcaagctaaagcttgaagccc 186
Query: 184 cagagaccctgaagggatggtaggagtttcacctgttcccagaaccaggcccctgcacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cagagaccctgaagggatggtaggagtttcacctgttcccagaaccaggcccctgcacat 126
Query: 244 agccacaggcccctatagagagaattgtggccttttttcatgtaggggcagtgctcc-ca 302
|||||||||||||||||||||||||||||||| | |||| |||||||||||| || ||
Sbjct: 125 agccacaggcccctatagagagaattgtggccatcagtcatataggggcagtgc-ccaca 67
Query: 303 agacctaccac 313
|||||||||||
Sbjct: 66 agacctaccac 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_i12.g1 MSMg01no163_i12.g1 CHROMAT_FILE:
MSMg01no163_i12.g1 PHD_FILE: MSMg01no163_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:08 2005
(282 letters)
>mm_chr2_159106537_159107218
Length = 682
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 taagtggagtacagggagcctacttaaaattatgggtctggttcctgttactctctaatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 taagtggagtacagggagcctacttaaaattatgggtctggctcctgttactctctaatg 260
Query: 61 gccatgtgatgtatgcttctattagataaagtaagaggtcaatctatacatttcttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccatgtgatgtatgcttctattagataaagtaagaggtcaatctatacatttcttacaa 320
Query: 121 ggcaaggcattttgtctttattgatgatgcttgacacatgtgttccatgcgcaggtgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaaggcattttgtctttattgatgatgcttgacacatgtgttccatgcgcaggtgaga 380
Query: 181 cacatgtgataataatgcactattactgtgagtcttcctggagtcttgtttatcacctgt 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 cacatgtgataataatgcactattactgtgagtattcctggagtcttgtttatcacctgt 440
Query: 241 ctaggtttttgatgaagatgacttgggctagggctctagcag 282
|||||| | |||||||||||||||||||||||||||||||||
Sbjct: 441 ctaggtgtgtgatgaagatgacttgggctagggctctagcag 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
