Query= MSMg01no163_i18.b1 MSMg01no163_i18.b1 CHROMAT_FILE:
MSMg01no163_i18.b1 PHD_FILE: MSMg01no163_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:09 2005
(314 letters)
>mm_chr2_7500866_7501579
Length = 714
Score = 553 bits (286), Expect = e-162
Identities = 304/310 (98%)
Strand = Plus / Plus
Query: 5 gaattccactaataagcatgcaaaagaacatttgctattttctatcatgtgagatgaagt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccactaataaacatgcaaaagaacatttgctattttctatcatgtgagatgaagt 264
Query: 65 actattgatatcagtggacagaagtactgagggctagagccatggaaaattcaatccaag 124
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct: 265 actattgatatcagtggacagaagtactgagggctagtgccatggaaaatccaatcccag 324
Query: 125 ggtggtcaatgttcatttattgattttggtaggtcacagtaaccaaaagtaaccacatgg 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggtcaatgttcatttattgattttggtaggtcacagtaaccaaaagtaaccacatgg 384
Query: 185 taagaactgaagtttgatttcttttacttaacactttcttgttcatctaactataaatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagaactgaagtttgatttcttttacttaacactttcttgttcatctaactataaatga 444
Query: 245 gatggtataaaccatggggaagagtctgcagcctaagtaaggaaacaggaacacaggcag 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 gatggtataaaccatggggaagagtctgcagccgaagtaaggaaacaggaacacaggcag 504
Query: 305 gaataagagc 314
||||||||||
Sbjct: 505 gaataagagc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_i18.g1 MSMg01no163_i18.g1 CHROMAT_FILE:
MSMg01no163_i18.g1 PHD_FILE: MSMg01no163_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:10 2005
(285 letters)
>mm_chr2_7651899_7652583
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 catcaattttagaaacttttctttttcttttcttctctgcagaaaatcacctcctttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 catcaattttagaaacttttctttttcttttcttctctgcagaaaatcacctcctttcca 426
Query: 61 atggttttgctttatcagtgattacacatgtaagcccctgatgtcaccatatgagattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atggttttgctttatcagtgattacacatgtaagcccctgatgtcaccatatgagattcc 366
Query: 121 tgatcagctttggctgattggctttcaggaggatgaaggaggatgcagagcaagtggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgatcagctttggctgattggctttcaggaggatgaaggaggatgcagagcaagtggctc 306
Query: 181 taggttttgctttaaggggaaggcaactggggttcagctgccaaattgataagaaacaga 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tagtttttgctttaaggggaaggcaactggggttcagctgccaaattgataagaaacaga 246
Query: 241 ggaccgtgctccagccaagcagaaaactcagtctcaaaaattgct 285
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 245 ggaccgtgcaccagccaagcagaaaactcagtctcaaaaattgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
