Query= MSMg01no164_c10.b1 MSMg01no164_c10.b1 CHROMAT_FILE:
MSMg01no164_c10.b1 PHD_FILE: MSMg01no164_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:55 2005
(320 letters)
>mm_chr2_68347479_68348196
Length = 718
Score = 571 bits (295), Expect = e-167
Identities = 311/317 (98%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccaaagatagcttttgttaaaaatgacatcgtttaagaatgtagcttatttgt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccaaagatagtttttgttaaaaatgacatcgtttaagaatgtagcttatttgt 263
Query: 64 ttgtttgtttccaaatttagagtctgaccttgggaaggccaaaatcaaaacaatcatctc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgtttgtttccaaatttagagtctgaccttgggaaggccaaaatcaaaacaatcatctg 323
Query: 124 agtaaacttggtcacttgaggaagctgagatcatgggagcttgagaatggcttggaattc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtaaacttggtcacttgaggaagctgagatcatgggagcttgagaatggcttggaattc 383
Query: 184 cagtctgcccccaaagtcttcatgttgttcttgaatggaataattaaaaaagcaaaagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 cagtctgcccccaaagtcttcatgttgttcttgaatggaataattaaaaaa--aaaagag 441
Query: 244 ttaatgaaaaatgagaaagtgtttgcagctgacaccgtacaattgtcttagctctctctg 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaatgaaaaatgagaaactgtttgcagctgacaccgtacaattgtcttagctctctctg 501
Query: 304 ttgtccgtgattctgaa 320
|||||| ||||||||||
Sbjct: 502 ttgtccatgattctgaa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_c10.g1 MSMg01no164_c10.g1 CHROMAT_FILE:
MSMg01no164_c10.g1 PHD_FILE: MSMg01no164_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:55 2005
(628 letters)
>mm_chr2_68458443_68459469
Length = 1027
Score = 1158 bits (599), Expect = 0.0
Identities = 617/623 (99%), Gaps = 1/623 (0%)
Strand = Plus / Minus
Query: 6 gggagtgaaatatgcaatacacacacacaagcacacacgcacacacatacaccactgaat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gggagtgaaatatgcaatacacacacacaagcacacacgcacacacatacaccactgaat 820
Query: 66 aaaaaacaacaccaaaggaaaacatcatagtatttataaagtagtatattgcatgatttg 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 -aaaaacaacaccaaaggaaaacatcatagtatttataaagtagtatattgcatgatttg 761
Query: 126 ttatcacttatgtggttatatgaccgatggaggacaatccagattcataagttagaacac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ttatcacttatgtggttatatgaccgatggaggacaatccagattcataagttagaacac 701
Query: 186 agattagatgcagataactaagacaatgatgcacctatagaattaaggtggacatgcttt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agattagatgcagataactaagacaatgatgcacctatagaattaaggtggacatgcttt 641
Query: 246 taaagatgcaggattttcctgtttggtcaggacgatttaaatatgagcgataaagtgaaa 305
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 640 taaagatgcaggattttcctgtttgctcaggacgatttaaatatgagggataaagtgaaa 581
Query: 306 ttcatttacttatttataatgattgtatttcattttaagcagtatctattgttttattgt 365
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 580 ttcatttatttatttataatgattgtatttcattttaagtagtatctattgttttattgt 521
Query: 366 tactatttagatgtcattagtcataatgatctatatttaattgaattgaattttaaaaca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tactatttagatgtcattagtcataatgatctatatttaattgaattgaattttaaaaca 461
Query: 426 aataccatatgatctttactgatttacaaactcttgagaagttagttggtatacaacata 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aataccatatgatctttactgatttacaaactcttgagaagttagttggtatacaacata 401
Query: 486 atatctaggaaactcatattttatcatactgaagtgaaatctatgggaatatacttatgt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atatctaggaaactcatattttatcatactgaagtgaaatctatgggaatatacttatgt 341
Query: 546 ccagtagaattataatggaaattcttaagattcagtgtcttgagttgttcaaggaggcta 605
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 340 ccagtagaattataatggaaattcttaagattcaatgtcttgagttgttcaaggaggcta 281
Query: 606 acgggaaatttgttctcagtctt 628
|||||||||||||||||||||||
Sbjct: 280 acgggaaatttgttctcagtctt 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space: 628506
Effective search space used: 628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
