Query= MSMg01no164_l20.b1 MSMg01no164_l20.b1 CHROMAT_FILE:
MSMg01no164_l20.b1 PHD_FILE: MSMg01no164_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:40 2005
(321 letters)
>mm_chr2_48892726_48893446
Length = 721
Score = 495 bits (256), Expect = e-144
Identities = 292/310 (94%), Gaps = 10/310 (3%)
Strand = Plus / Minus
Query: 5 gaattccagttcctttacatcttcatgaatagttgttactatcttttaattgtaaagact 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaattccagttcctctacatcttcatgaatagttgttactatcttttaattgtaaagact 251
Query: 65 tggtgaatgtgaaattgcattatggtattaattgccattcctctac----------tgtg 114
||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 250 tggtgaatgtgaaattgtattatggttttaattgccattcctctaccaatgttgattgtg 191
Query: 115 tttctttgctgttttaaaacttctatagaggggtcgaaaagatggctcaacaattaagag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttctttgctgttttaaaacttctatagaggggtcgaaaagatggctcaacaattaagag 131
Query: 175 cacttgctgtttagaaccagagtttgtttcccatcacataccacttacaattccagcttc 234
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 130 cacttgctgttaagaaccagagtttgtttcccgtcacataccacttacaattccagtttc 71
Query: 235 aggaaatccaacacccttccccgcctctgtgacacacatatacatgtacatataggaata 294
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 70 aggaaatccaacacccttccacgcctctgtgacacacatatacatgtacatataggaaca 11
Query: 295 cacacacaca 304
||||||||||
Sbjct: 10 cacacacaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_l20.g1 MSMg01no164_l20.g1 CHROMAT_FILE:
MSMg01no164_l20.g1 PHD_FILE: MSMg01no164_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:40 2005
(542 letters)
>mm_chr2_48721238_48722179
Length = 942
Score = 1002 bits (518), Expect = 0.0
Identities = 533/538 (99%)
Strand = Plus / Plus
Query: 5 aattccaggacagccagggctacacagagaaaccctgtctcaaaaaaagtataatgtcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aattccaggacagccagggctacacagagaaaccctgtctcaaaaaaagtataatgtcct 264
Query: 65 tgctgggcttcgcttagaccctctttatgatgttgaagaagttctttttttaattccaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctgggcttcgcttagaccctctttatgatgttgaagaagttctttttttaattccaag 324
Query: 125 tatgctgttgttgttaattataaatgggtgttaaattttatctgatgtttcttctgtgtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgctgttgttgttaattataaatgggtgttaaattttatctgatgtttcttctgtgtt 384
Query: 185 ggtttatgtgcttatattatttttcactagactgcagtgactaagtttgaatgctgaact 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtttatgtgcttatattaattttcactagactgcagtgactaagtttgaatgctgaact 444
Query: 245 agccttgcatagctgaagtaagatgtggtgtcttagttttcattttttaaaatacattat 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 agccttgcatagctgaagtaagatgtggtgtcttagttttcatttttttaaatacattat 504
Query: 305 tagattgtgtttgctaacattttgttaagaacttaacatccaagttagtggcccattttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 tagattgtgtttgctaacattttgttaagaacttaacatccaagttagtggcctgttttt 564
Query: 365 cctctgctgttactttatataagtgtggtacaatttcacagtcatattgaaattaattag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctctgctgttactttatataagtgtggtacaatttcacagtcatattgaaattaattag 624
Query: 425 ttgattgaaatgagtttttactttcaaatgaataaggaagtattgtttttaatccagaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgattgaaatgagtttttactttcaaatgaataaggaagtattgtttttaatccagaag 684
Query: 485 tgattgtgtataaaactagcattgctatattattttaatatttggtgccaaaaaccaa 542
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 685 tgattgtgtataaaactagcattgttatattattttaatatttggtgccaaaaaccaa 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
