ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCAGGGCCAGGAAGTGGGTGGATTGGTGAGCAGGAGGGGGAGAGAATA
GGGGGTTTTGNANNNNNNNNNNNNANNNCNNNNNTNNTNNNNNNNNNNNN
NNNNNNNNNTNNTTTTNTTCGCTTTTTTTTCAACCTTTTTTCTTTCTTCC
TATACCCCCTTTCCCCTTTTTTCCTTATTTTTTATCCGGCCTCTTTGCTT
TCCGGTTTTTTTTTTGTTCGTTTTTTTCTTTTTCTCCCCCTTTATTTTCT
TATTACCCTTCTTCCGGCAATTTTTTTTTTGCTATCTTTATCCCCCCCCT
TGCGGCGAAAAGATTTTGNGGTGAGTTCCCCAAAAACAAAGTCCCCNGGT
TTGTTTTAATTTGGTGTTTTTTTTTTTGTGCCCCCCCCCAAAAATAAAAA
AAAAAATATGGCGGTGGGGGGGGGGGGTTTCTATCCCCATTTTTTTCTTT
CCCTACTTCTTTTGTTTTCTATTTTCCCCTCTTTTTTATCTTTCCCTCCC
TCTTTCCTTTTTTTGTTTATTTCCCCTTCGTATTTCCCTTTTCGTTTTTC
CTATTATTTATTTTCCTTTTTGTTCCGCCTTCTCTTTTTTTTCGTTTTTT
CCCTCCGATTTCTTATTATGCTTTTCCCGATTGTTTTTGCCCCCCTTAGA
TTCGCCCTATCCTACATTTCCCTATTTTTGTTCTTTGCCTTTCGCCTTAT
TTTCCACCCGTTTTTCTTTATCGGCGTCCTCTTTTTTTGCGTCCTATCTT
TCCTTCCTTTTTTCTTTTCTCGCTATACGCTTTATCCTGTCTTCTGTCTT
CN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGCCCTACCTTCTCCCCTTCTGTGGCCC
AGTGCTTGGCTTACTAATTCTGCTCTCACTAGGACCTTATCTTTTTAATA
GAGTTATGGCCTTTATTTAGAGATAAAGATGCAATTAAGGCCCAACCTTT
GCTGATTCATTATCACCAGCTGGCAATGTCAGATCTGGGAAATGGTTTTG
ATGATAATCTTACAAAAGGCCCTTAAAATAACTTACCTGATGCTTGGCCC
TTCACCTTTCCAGTGCAATGGACTGGCTAGCCAGTGATAGGCAACTGAGA
GGAGGAAGCTGCCCTTAGCATGAATGATAACCTAAGACAGGGAACCCCCA
CTAAAATATCTCCCCCTCCCCACACACACACTGTGGGAAGCTGTTGCAGA
GTGGCAGTTACAGAGTGACAGTTGCAGAGTGGCAGTTGGCTACTGCTGGC
CACCACACATACACAGGCAGTAAAGGTTCTTTTGCCAAGATGAGGTTTTG
AGAATTAACCAAAGTTAACCAATCAGATGAGAGACAAGTTAACCAATCAG
ATGAGAGAGAATGCCTCTCCTAGGCCTATATAAGCAGCACCAGTTCTGGG
CTTGGGGTCACTTCGCCTCTGCAATCAAGCTCTCTCAATATACGTGTGTG
GAAGGATCCTGTTGCAGCGTCGTTCTTGCTGG

Query= MSMg01no164_p18.g1 MSMg01no164_p18.g1 CHROMAT_FILE:
MSMg01no164_p18.g1 PHD_FILE: MSMg01no164_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:58 2005
         (527 letters)



>mm_chr2_47547115_47548044
          Length = 930

 Score =  998 bits (516), Expect = 0.0
 Identities = 526/530 (99%), Gaps = 3/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgccctaccttctccccttctgtggcccagtgcttggcttactaattctgctctcactag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccctaccttctccccttctgtggcccagtgcttggcttactaattctgctctcactag 260

                                                                       
Query: 61  gaccttatctttttaatagagttatggcctttatttagagata--aagatgcaattaagg 118
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 261 gaccttatctttttaatagagttatggcctttatttagagatataaagatgcaattaagg 320

                                                                       
Query: 119 cccaacctttgctgattcattatcaccagctggcaatgtcagatctgggaaatggttttg 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaacctttgctgattcattatcaccagctggcaatgtcagatctgggaaatggttttg 380

                                                                       
Query: 179 atgataatcttacaaaaggcccttaaaataacttacctgatgcttggcccttcacctttc 238
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 atgataatcttacaaaaggcccttaaaataactcacctgatgcttggcccttcacctttc 440

                                                                       
Query: 239 cagtgcaatgg-actggctagccagtgataggcaactgagaggaggaagctgcccttagc 297
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtgcaatgggactggctagccagtgataggcaactgagaggaggaagctgcccttagc 500

                                                                       
Query: 298 atgaatgataacctaagacagggaacccccactaaaatatctccccctccccacacacac 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaatgataacctaagacagggaacccccactaaaatatctccccctccccacacacac 560

                                                                       
Query: 358 actgtgggaagctgttgcagagtggcagttacagagtgacagttgcagagtggcagttgg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgtgggaagctgttgcagagtggcagttacagagtgacagttgcagagtggcagttgg 620

                                                                       
Query: 418 ctactgctggccaccacacatacacaggcagtaaaggttcttttgccaagatgaggtttt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctactgctggccaccacacatacacaggcagtaaaggttcttttgccaagatgaggtttt 680

                                                             
Query: 478 gagaattaaccaaagttaaccaatcagatgagagacaagttaaccaatca 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaattaaccaaagttaaccaatcagatgagagacaagttaaccaatca 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 930
Length adjustment: 10
Effective length of query: 517
Effective length of database: 920
Effective search space:   475640
Effective search space used:   475640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)