Query= MSMg01no165_a21.b1 MSMg01no165_a21.b1 CHROMAT_FILE:
MSMg01no165_a21.b1 PHD_FILE: MSMg01no165_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:04 2005
(699 letters)
>mm_chr2_43052317_43053414
Length = 1098
Score = 743 bits (384), Expect = 0.0
Identities = 426/444 (95%), Gaps = 11/444 (2%)
Strand = Plus / Minus
Query: 3 gaattctgtgattt--gttttctgagcatgccttctggaaggcttacagtgctgtctagg 60
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaattctgtgatttgggtt---tgagcatgccttctggaaggcttacagtgctgtctagg 379
Query: 61 ttaggggggccttttgtgtccctgcttaccacagacctcctgggagatagtcaggctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttaggggggccttttgtgtccctgcttaccacagacctcctgggagatagtcaggctaag 319
Query: 121 gggtgtgggagacaggcaggagcgccctatctgccttgggcagaattgcagaatttggtt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 318 gggtgtgggagacaagcaggagcgccctatctgccttgggcagaattgcagaatttgatt 259
Query: 181 tcctttatccatgatttcaattgtttgaaggaattatttgtttgtttgtttgtttattta 240
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 258 tcctttatccatgatttcaattgtttgaaggaa----ttgtttgtttgtttgtttgttta 203
Query: 241 tttatttattcaccttaaatcctgacttcagtgccccctcttctcagttccactcccaca 300
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 tttatttattcaccttaaatcctgacttcagtggtccctcttctcagttccactcccaca 143
Query: 301 gaccctacctttcccttctacctcccccccatcctcctctgccatatcaactcactgcag 360
||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 142 gactctacctttcccttctacc-ccccccc-tcctcctctgccatatcaactcactgcag 85
Query: 361 tactaagtacatcttttcccactgagattagacaagccagtacagttagggtaatgagat 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tactaagcacatcttttcccactgagattagacaagccagtacagttagggtaatgagat 25
Query: 421 caccaggtaggcaacagaataagg 444
||||||||||||||||||||||||
Sbjct: 24 caccaggtaggcaacagaataagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1098
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1088
Effective search space: 749632
Effective search space used: 749632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_a21.g1 MSMg01no165_a21.g1 CHROMAT_FILE:
MSMg01no165_a21.g1 PHD_FILE: MSMg01no165_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:04 2005
(399 letters)
>mm_chr2_42893690_42894488
Length = 799
Score = 630 bits (326), Expect = 0.0
Identities = 344/350 (98%)
Strand = Plus / Plus
Query: 1 ttttgtggttgggttacctcactcaagatgggataactttaaagatggcatttaagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgtggttgggttacctcactcaagatgggataactttaaagatggcatttaagatat 260
Query: 61 tattacaaagaggagagttgttcttggaaacaattaagttatgattttaaaaaaaaagtc 120
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 261 tattacaaagaggagagttgttcttggaaacaattaagttatgtttttttaaaaaaagtc 320
Query: 121 attaccacactttagttttagaaacaaaaaatttctgaagaaccattctctctgaagtag 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 attaccacactttagttttagaaacaaaaaatttctgaagaatcattctctctgaagtag 380
Query: 181 gcctgttgaataatttttaatgtttttataggctagttcacacctgtgctcaggtatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctgttgaataatttttaatgtttttataggctagttcacacctgtgctcaggtatttt 440
Query: 241 ttggtaactctcttcactttttccggtttatttattacccccctagtcatttgcagtcaa 300
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 441 ttggtaactctcttcactttttccagtttatttattatccccctagtcatttgcagtcaa 500
Query: 301 ggtaactattcaagttatcctatctttcatttgaccaatcatatttcttt 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtaactattcaagttatcctatctttcatttgaccaatcatatttcttt 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
