Query= MSMg01no166_e20.b1 MSMg01no166_e20.b1 CHROMAT_FILE:
MSMg01no166_e20.b1 PHD_FILE: MSMg01no166_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:45 2005
(313 letters)
>mm_chr2_109278451_109279161
Length = 711
Score = 578 bits (299), Expect = e-169
Identities = 306/309 (99%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttgctccttcactctcccccttttgttttatgattttgcttcttatccatga 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattctttgctccttcactctcccccttttgttttatggttttgcttcttatccatga 263
Query: 64 gatgagcagtgtgtagttccatgtttggtcacaatattgctgtgtttctccgtagggcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatgagcagtgtgtagttccatgtttggtcacaatattgctgtgtttctccgtagggcct 323
Query: 124 aaacaataaacccagccagttgcaagctatgtatcaaagtaacccattttttctcttcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaacaataaacccagccagttgcaagctatgtatcaaagtaacccattttttctcttcat 383
Query: 184 tgtaagttagttttctcaatgtgaaaatggacaacactcttatcaatgataaggtgggct 243
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 tgtaagttagttttctcaatgtgaaaatggacaacactc--atcaatgataaggtgggct 441
Query: 244 ctggaatttatgtatctttttcctttttcttttttaactttttaagaattaatacctatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctggaatttatgtatctttttcctttttcttttttaactttttaagaattaatacctatc 501
Query: 304 tagggccta 312
|||||||||
Sbjct: 502 tagggccta 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 711
Length adjustment: 9
Effective length of query: 304
Effective length of database: 702
Effective search space: 213408
Effective search space used: 213408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_e20.g1 MSMg01no166_e20.g1 CHROMAT_FILE:
MSMg01no166_e20.g1 PHD_FILE: MSMg01no166_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:45 2005
(629 letters)
>mm_chr2_109425845_109426878
Length = 1034
Score = 1123 bits (581), Expect = 0.0
Identities = 591/597 (98%), Gaps = 5/597 (0%)
Strand = Plus / Minus
Query: 38 gatacttgtgctatgatgttctgagcaggaagggaaaagttgacagaaagttgctaagca 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 gatacttgtgctatgatgttctgagcaggaagggaaaagttgacagaaagttgctaagca 975
Query: 98 aaaatgaaccagtcctggaatctttagaaaattcttattctcctctagattgtaaaagat 157
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 aaaatgaaccagccctggaatctttagaaaattcttattctcctctagattgtaaaagat 915
Query: 158 gctaaaatcaggagattctcctttaggaaagaatgctctggaggaaattccagagcatgg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gctaaaatcaggagattctcctttaggaaagaatgctctggaggaaattccagagcatgg 855
Query: 218 ctagacaattgttttgctaatactaaaagagcatcttggagatgattgggaaagactttt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ctagacaattgttttgctaatactaaaagagcatcttggagatgattgggaaagactttt 795
Query: 278 gcagatatttc-----ttttttttttgacctctaatctataaattcaccttttattatat 332
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gcagatatttctttttttttttttttgacctctaatctataaattcaccttttattatat 735
Query: 333 aaagttgcatgctttgacaagtttagtgcaacgtatttcatgaaacattttaagtatgtt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aaagttgcatgctttgacaagtttagtgcaacgtatttcatgaaacattttaagtatgtt 675
Query: 393 gactaaagcccaggttgagtacagtgcccaaacttaaactttatgaaacattagattttt 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gactaaagcccaggttgagtacagtgcccaaacttaaactttatgaaacattagattttt 615
Query: 453 gatgtctaagggcagaaaaacccacatagaaaaacagaattctgtggtagcaatgagcat 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gatgtctaagggcagaaaaacccacatagaaaaacagaattctgtggtagcaatgagcat 555
Query: 513 ctccttggtggacagcggatcacctcagctgttggtcgattgaggcctgtgcagatgttt 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctccttggtggacagcggatcacctcagctgttggtcgattgaggcctgtgcagatgttt 495
Query: 573 tacaagtgtttgcttttttgcaccttttcttctattgcccaggccccatctaatcag 629
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tacaagtgtttgcttttttgcaccttttcttctattgcccaggccccatctaatcag 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1034
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1024
Effective search space: 633856
Effective search space used: 633856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
