Query= MSMg01no166_k01.b1 MSMg01no166_k01.b1 CHROMAT_FILE:
MSMg01no166_k01.b1 PHD_FILE: MSMg01no166_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:11 2005
(643 letters)
>mm_chr2_7344167_7345209
Length = 1043
Score = 1205 bits (623), Expect = 0.0
Identities = 635/639 (99%)
Strand = Plus / Plus
Query: 5 gaattccataggcacgtgtgtcctctctctttcattagagtaatgtcttccaggctcaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataggcacgtgtgtcctctctctttcattagagtaatgtcttccaggctcaca 264
Query: 65 tctaactttgcgacagaattctcctttctaagtctgaatgccatttcactatgctaacat 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctaactttgcgacagaattctcatttctaagtctgaatgccatttcactatgctaacat 324
Query: 125 atgaatataataaaatataaagcagacacacctaaaagagtgcatggttatcagggacta 184
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acgaatataataaaatataaaacagacacacctaaaagagtgcatggttatcagggacta 384
Query: 185 aaatgggtacagaatttcagtgagaaatagtccagaattcagggacaggagtttcagaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgggtacagaatttcagtgagaaatagtccagaattcagggacaggagtttcagaag 444
Query: 245 ttctaagtctcaggtaacacacaaaaagacagttttgctcatgtaaaataaaaaagctgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctaagtctcaggtaacacacaaaaagacagttttgctcatgtaaaataaaaaagctgg 504
Query: 305 cctccacgattctattactattaggggcctacctctgagcacatgtcctctgccattttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctccacgattctattactattaggggcctacctctgagcacatgtcctctgccattttt 564
Query: 365 gtttaattttcaccccctggagactgtgttccacttgccgaagtacttcagaagtttggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtttaattttcaccccctggagactgtgttccacttgccgaagtacttcagaagtttggc 624
Query: 425 catctttgatattttcttgttggcacaaacaaattagactccactggccttcagtgagtt 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 catctttgatattttcttgttggcacaaacaaattagactccactggccttcagtgagct 684
Query: 485 gccttagagaagcctgttagacatagcagctcatgcaattcccaccagttctttggagat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccttagagaagcctgttagacatagcagctcatgcaattcccaccagttctttggagat 744
Query: 545 ctcacactaataatataatttgatcccatggcttgaattaaagaataagtcattattcta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcacactaataatataatttgatcccatggcttgaattaaagaataagtcattattcta 804
Query: 605 gtgtaaaactgtatcttctgatatgcaaagaggcagatc 643
|||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgtaaaactgtatcttctgatatgcaaagaggcagatc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_k01.g1 MSMg01no166_k01.g1 CHROMAT_FILE:
MSMg01no166_k01.g1 PHD_FILE: MSMg01no166_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:11 2005
(582 letters)
>mm_chr2_7526251_7527232
Length = 982
Score = 818 bits (423), Expect = 0.0
Identities = 438/443 (98%)
Strand = Plus / Minus
Query: 140 atctaataaatttaaaaaaaatctggccagtagaatattgaaccacttactacaataatt 199
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 atctaataaattttaaaaaaatctggccagtagaatattgaaccacttactacaataatt 923
Query: 200 ctccacatctaggggcctgatgagattgctgcataagtaaatatacttgccactaggtat 259
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 922 ctccacatctaggggtctgatgagattgctgcataagtaaatatacttgccactaagtat 863
Query: 260 actaatttaggtcctatttccaggaccccaatgatagagggagagaactaccttcgacac 319
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 862 actaatttaggtcctatttccaggaccccgatgatagagggagagaactaccttcgacac 803
Query: 320 attgtcctctggtctccacatttatttgcatgatacttatacatggcaagtttgcacagg 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 attgtcctctggtctccacatttatttgcatgatacttatacatggcaagtttgcacagg 743
Query: 380 tatttgtatatgcaaaccctcaaacatgcaattaaattagtttttttaaaaagccatgct 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tatttgtatatgcaaaccctcaaacatgcaattaaattagtttttttaaaaagccatgct 683
Query: 440 ctacctcaaattgatcgctactatcctttcccttcaaggtacattttataagaatatttg 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctacctcaaattgatcgctactatcctttcccttcaaggtacattttataagaatatttg 623
Query: 500 tccttctcaccagacaatataaaaagacaatggtatacatctctcaaaagttctagtaca 559
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 622 tccttctcaccagacaatataaaaagacaatggtatacatctcttaaaagttctagtaca 563
Query: 560 tggcatagtattacagtcagttg 582
|||||||||||||||||||||||
Sbjct: 562 tggcatagtattacagtcagttg 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
