Query= MSMg01no167_o10.b1 MSMg01no167_o10.b1 CHROMAT_FILE:
MSMg01no167_o10.b1 PHD_FILE: MSMg01no167_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:47 2005
(652 letters)
>mm_chr2_70929936_70930987
Length = 1052
Score = 1197 bits (619), Expect = 0.0
Identities = 643/655 (98%), Gaps = 7/655 (1%)
Strand = Plus / Plus
Query: 5 gaattctccagtctgccttgaaaacctgcaaagatgtttctagctgattatgatcagcag 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaattctccagtcagacttgaaaacctgcaaagatgtttctagctgattatgatcagcag 257
Query: 65 gactaaggagagaggtgttggctgtttaaaaatcaaagaactagtaactagtgtgtctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gactaaggagagaggtgttggctgtttaaaaatcaaagaactagtaactagtgtgtctat 317
Query: 125 tcagtcaagaaataaaagaaacctaaaatcatctttttatgcaaagaaaaaaattacagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcagtcaagaaataaaagaaacctaaaatcatctttttatgcaaagaaaaaaattacagg 377
Query: 185 ttgactattccttatctaagatgcttagcacgaaagtgttttgtaagtgaagttttcctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttgactattccttatctaagatgcttagcacgaaagtgttttgtaagtgaagttttcctt 437
Query: 245 gattttaggatatttgtgggtacattataaaatcctgagaatgggtcc-------aagca 297
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 438 gattttaggatatttgtgggtacattataaaatcctgagaatgggtccaaggtctaagca 497
Query: 298 tgaagttcgtttaatgtttaatttgtgtcttgtatacataacctgaaggtgcttttatgc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgaagttcgtttaatgtttaatttgtgtcttgtatacataacctgaaggtgcttttatgc 557
Query: 358 ggtatcttaactgcacctgtccatgttttaactgtgtcccagcacattagatcaggtgtt 417
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agtatcttaactgtacctgtccatgttttaactgtgtcccagcacattagatcaggtgtt 617
Query: 418 gaattttgtagtcattacatcatgttagcactagtttcagtttttagagcattttttatt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattttgtagtcattacatcatgttagcactagtttcagtttttagagcattttttatt 677
Query: 478 tctggattatggatattaatatgcattgatgttttagaacaaagcagaatgtatgtgagc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tctggattatggatattaatatgcattgatgttttagaacaaagcagaatgtatgtgagc 737
Query: 538 taaaaagaaatccttccaaagctggtcctgttcagaattgtcatctggaacacagacgta 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 taaaaagaaatccttccaaagctggtcctgttcagaattgtcatctggaacacagacgta 797
Query: 598 attacctcgtgaacaagatagtaacgtgttaaagtctaatactcacatctagaga 652
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 798 attacctcgtgaacaagatagtaacgtgttaaagtctaatactcacgtctagaga 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_o10.g1 MSMg01no167_o10.g1 CHROMAT_FILE:
MSMg01no167_o10.g1 PHD_FILE: MSMg01no167_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:47 2005
(415 letters)
>mm_chr2_71027891_71028705
Length = 815
Score = 764 bits (395), Expect = 0.0
Identities = 407/411 (99%)
Strand = Plus / Minus
Query: 5 aagtgagcggcaaggagaagattgacgattttttactttagttaaaataaaatctattac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aagtgagcggcaaggagaagattgacgattttttactttagttaaaataaaatctattac 556
Query: 65 atttcagagtagtaaattttctgccagcctagtgtaagctggctatgatgatcatttgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atttcagagtagtaaattttctgccagcctagtgtaagctggctatgatgatcatttgga 496
Query: 125 gaaagagggggaagtttttctacaagcaaaatacataacttataaaatgttttaaaggac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaaagagggggaagtttttctacaagcaaaatacataacttataaaatgttttaaaggac 436
Query: 185 atattgaaatttgtagtatttactaaaatggcataatataaatattttgaaccctcaatt 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atattgaaagttgtagtatttactaaaatggcataatataaatattttgaaccctcaatt 376
Query: 245 ccactgagaaaggagtttagtgaaaagatttacaggaattgagtcgcaaatatcatgaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccactgagaaaggagtttagtgaaaagatttacaggaattgagtcgcaaatatcatgaaa 316
Query: 305 ttttgtttatagaaacgaaaatattgaagaagactcccaatcccatgctggtttggctgt 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 315 ttttgtttatagaaacgaaaatattgaagaagactaagaatcccatgctggtttggctgt 256
Query: 365 tattgtatagaatgtatatgtttgtagcatagagtagcctcactcgcctgt 415
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tattgtatagaatgtatatgtttgtagcatagagtagcctcactcgcctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
