Query= MSMg01no169_g16.b1 MSMg01no169_g16.b1 CHROMAT_FILE:
MSMg01no169_g16.b1 PHD_FILE: MSMg01no169_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:06 2005
(312 letters)
>mm_chr2_12468847_12469558
Length = 712
Score = 565 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Plus
Query: 5 gaattcatggacgttcatgtatgaaacatggaagaacacatttaaccctgtaggctccct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatggacgttcatgtatgaaacatggaagaacacatttaaccctgtaggctccct 264
Query: 65 ttgtattttcatttcttagtttagtctcatttaatatctatgacatcataatatataacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtattttcatttcttagtttagtctcatttaatatctatgacatcataatatataacc 324
Query: 125 tcttgctctgtctctgctttagggtcttttcctcccaagccttgcctagctttacattgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttgctctgtctctgctttagggtcttttcctcccaagccttgcctagctttacattgt 384
Query: 185 tcatgagctgcagctttgttcttgtcccccctttgctgaataatttccaatgactcttac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcatgagctgcagctttgttcttgtcccccctttgctgaataatttccaatgactcttac 444
Query: 245 ttcttgtattataaaaggtcaaggtgtttattacactccagtacaatttctgcacgatag 304
|||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||
Sbjct: 445 ttcttgtattataaaaggtcaaggtgcttaataaactccagtacaatttctgcaagatag 504
Query: 305 tcctaatg 312
||||||||
Sbjct: 505 tcctaatg 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_g16.g1 MSMg01no169_g16.g1 CHROMAT_FILE:
MSMg01no169_g16.g1 PHD_FILE: MSMg01no169_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:06 2005
(285 letters)
>mm_chr2_12623377_12624061
Length = 685
Score = 402 bits (208), Expect = e-116
Identities = 229/240 (95%), Gaps = 7/240 (2%)
Strand = Plus / Minus
Query: 1 actctcctctcagtcctcccacaattgggggtggggagaggacaggatgcacctcagaat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 454 actctcctctcagt-------caattgggggtggggagaggacaggatgcacctcagaat 402
Query: 61 acattgccatatttttttatattttattgcttagtgtttgctaagcatatgtatgcctac 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acattgccatattttcttatattttattgcttagtgtttgctaagcatatgtatgcctac 342
Query: 121 cctagggatgtctgtggcgcagtgggaaaacatgggatacacacacagtgtcatgagaga 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cctagggatgtctgtggtgcagtgggaaaacatgggatacacacacagtgtcatgagaga 282
Query: 181 gaaggagttattccatgcgtaactgtctgaggtcattagacaagaccacagcgaggccca 240
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 281 gaaggagttattccatgcataactgtctgaggtcattagacaagaccatagcgaggccca 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
