Query= MSMg01no170_e05.b1 MSMg01no170_e05.b1 CHROMAT_FILE:
MSMg01no170_e05.b1 PHD_FILE: MSMg01no170_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:10 2005
(319 letters)
>mm_chr2_12823637_12824355
Length = 719
Score = 514 bits (266), Expect = e-150
Identities = 313/354 (88%), Gaps = 39/354 (11%)
Strand = Plus / Minus
Query: 5 gaattcaaacagtggttccatttatatctactgaaatcagccaacattggcaccaagcta 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 gaattcaaacagtggttccatttatatcaactgaaatcagccaacattggcaccaagcta 562
Query: 65 caa---------------------------------------gctttcttctgtggagta 85
||| ||||||||||||||||||
Sbjct: 561 caaggaaaagtaaaagaacaacagatcaaaattcagggcagtgctttcttctgtggagta 502
Query: 86 aaggtatgccaccatgcagacgcaattgatatcctattaccgtatacatcagaagatgcc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtatgccaccatgcagacgcaattgatatcctattaccgtatacatcagaagatgcc 442
Query: 146 ttagctattttcagtggtacccgaaacactttcttaccctggatggtggacacaagcttt 205
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 ttagctattttcagtggtacccgaaacactttcttaccctggatggtggacacaagtttt 382
Query: 206 caattttgtaacttactataccttagacatgttatacatatttttgctttcattcagttt 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattttgtaacttactataccttagacatgttatacatatttttgctttcattcagttt 322
Query: 266 gagtgtgtatgcacactcttaccaatggtgtgcacacatgtgcatgtgggtatg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgtgtatgcacactcttaccaatggtgtgcacacatgtgcatgtgggtatg 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_e05.g1 MSMg01no170_e05.g1 CHROMAT_FILE:
MSMg01no170_e05.g1 PHD_FILE: MSMg01no170_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:10 2005
(289 letters)
>mm_chr2_12719634_12720322
Length = 689
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 1 atgttttctagcaaatgtgaccatgtttcaagggtatttgaagatccccttccagaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgttttctagcaaatgtgaccatgtttcaagggtatttgaagatccccttccagaacat 260
Query: 61 acaagaagcctgcttaataaagcatcttaagtagagtctctgctgggtacagttctagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaagaagcctgcttaataaagcatcttaagtagagtctctgctgggtacagttctagat 320
Query: 121 gctagtcaaagaagaagaaatatttgcattgattgtaaaaaataagaaaaaggaatagca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagtcaaagaagcagaaatatttgcattgattgtaaaaaataagaaaaaggaatagca 380
Query: 181 taaaatcatgagtagcacaggtcatgactttagcccaaggatgggagatactgtggtctt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 taaaatcatgagtagcacaggtcatgactttagcccaaggatgcgagatactgtggtctt 440
Query: 241 cctctgatgttgttttctgagaccttgtgagttcagagttcactg 285
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 cctctgatgttgttttctgagaccttgtgagttcggagttcactg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
