Query= MSMg01no171_c14.b1 MSMg01no171_c14.b1 CHROMAT_FILE:
MSMg01no171_c14.b1 PHD_FILE: MSMg01no171_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:19 2005
(314 letters)
>mm_chr2_162871231_162871948
Length = 718
Score = 563 bits (291), Expect = e-165
Identities = 303/309 (98%), Gaps = 4/309 (1%)
Strand = Plus / Minus
Query: 5 gaattcaaaaccacagagctca----gcgggcgggcagaaggtgctttacagtcgtcaga 60
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 513 gaattcaaaaccacagagctcagcgggcgggcgggcagaaggtactttacagtcgtcaga 454
Query: 61 agttctggaatgccatttcagtcacatcaatatcatgttccagatgagccaggaaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agttctggaatgccatttcagtcacatcaatatcatgttccagatgagccaggaaacaca 394
Query: 121 gaattttattttatttaaattcagagcctgaaacaggaactctttggtattttgaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaattttattttatttaaattcagagcctgaaacaggaactctttggtattttgaacatt 334
Query: 181 aattcgacattcaaaatcaccattagctgggataagtggggattagctggcctgaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 333 aattcgacattcaaaatcaccattagctgggataagtggggattagctggcctaaaggct 274
Query: 241 gattctaagcccaggatgaagttcttacaactccaggacagattgtgcacactgccacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gattctaagcccaggatgaagttcttacaactccaggacagattgtgcacactgccacag 214
Query: 301 caaccatgt 309
|||||||||
Sbjct: 213 caaccatgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 718
Length adjustment: 9
Effective length of query: 305
Effective length of database: 709
Effective search space: 216245
Effective search space used: 216245
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_c14.g1 MSMg01no171_c14.g1 CHROMAT_FILE:
MSMg01no171_c14.g1 PHD_FILE: MSMg01no171_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:19 2005
(290 letters)
>mm_chr2_162741049_162741736
Length = 688
Score = 513 bits (265), Expect = e-150
Identities = 281/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1 ttactgtggctgctgggaactgcactcaggccctcaagagcgtgcagcaagagcttcatc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttactgtggctgctgggaactgcactcaggccctcaagagcgtgccgcaagagcttcatc 260
Query: 61 tccccctgccctcttccacgtttaaaagaagtataggtacacacacacacactcacaccg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 261 tccccctgccctcttccacgtttaagagaagtataggtacacacacacaca--cacaccg 318
Query: 121 caacatcaagaggccatatctcagcttggagtctgtctagagagagcagctttaaaagct 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 319 caacatcaagaggccatatctcagcttggagtctgtctagagagcgcagctttaaaagct 378
Query: 181 gacctgctgtaaacctttaatcccagcactcgggaggcagcctggtctacagagtgagct 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gacctgctgtaagcctttaatcccagcactcgggaggcagcctggtctacagagtgagct 438
Query: 241 ccaagagaaccagggccacatacagaaagcctgtctcaaaaacaaaa 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccaagagaaccagggccacatacagaaagcctgtctcaaaaacaaaa 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 688
Length adjustment: 9
Effective length of query: 281
Effective length of database: 679
Effective search space: 190799
Effective search space used: 190799
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
