Query= MSMg01no171_d20.b1 MSMg01no171_d20.b1 CHROMAT_FILE:
MSMg01no171_d20.b1 PHD_FILE: MSMg01no171_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:25 2005
(328 letters)
>mm_chr2_62697715_62698443
Length = 729
Score = 615 bits (318), Expect = e-180
Identities = 324/326 (99%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaattaaaggttttacaatgtaactaatgtttattttcatctttcctttgaaag 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 529 ggaattcaattaaaggttttacaatgcaactaatgtttattttcatctttcctttgaaag 470
Query: 64 tctcttctttaaggattacatttaatatagaaaagaaaaggagctatgacattgttggaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tctcttctttaaggattacatttaatatagaaaagaaaaggagctatgacattgttggaa 410
Query: 124 aaacaaataaagaagaactttaattaaattttgccatagtctccttattatatagacaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aaacaaataaagaagaactttaattaaattttgccatagtctccttattatatagacaaa 350
Query: 184 aacatatacctgagatcaaagtccttgtgatt-aaaaaaatagaaatatgtacttagtta 242
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 349 aacatatacctgagatcaaagtccttgtgattaaaaaaaatagaaatatgtacttagtta 290
Query: 243 agaatagattgttgatcaatatccaggtcagcaaaagcatacctcataggggctccttgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agaatagattgttgatcaatatccaggtcagcaaaagcatacctcataggggctccttgt 230
Query: 303 gagcaccatatgtaatattttgttac 328
||||||||||||||||||||||||||
Sbjct: 229 gagcaccatatgtaatattttgttac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_d20.g1 MSMg01no171_d20.g1 CHROMAT_FILE:
MSMg01no171_d20.g1 PHD_FILE: MSMg01no171_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:25 2005
(244 letters)
>mm_chr2_62573664_62574307
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 1 aattcctgccatacaatttactaatttcaatattcagcttgcctttttctcc-ggtagtt 59
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 201 aattcctgccatacaatttactaatttcaatattcagcttgcctttt-ctctaggtagtt 259
Query: 60 aatattgataaacttttgttgcagtaatttgcttgatattttcagaagcatttgggaaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatattgataaacttttgttgcagtaatttgcttgatattttcagaagcatttgggaaat 319
Query: 120 ttaagaatgacatttcagggatgcatagatcaacattggacctctaccttggcactttct 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaagaatgacatttcagggatgcatagatcaacattggacctctaccttggcactttca 379
Query: 180 tgtctcaggttgaaagtcagttctagatttgtcagaaagtgatcagaaaattctggatac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtctcaggttgaaagtcagttctagatttgtcagaaagtgatcagaaaattctggatac 439
Query: 240 atat 243
||||
Sbjct: 440 atat 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
