TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGTCTTAACTGCAGTGAATTCATATGTGTAACTTAAAAACTTATT
TTTTATATATATATATTCACCAATCACCTCTGGCTCTTACAACATTTTTT
GACCCTCTTTTAAAATGCTCTATGAACCTTGGGAGGAGTGTGTGGGATAT
AAATGCTCTAGACATGAGTAGTTGTTATTATAAAAAGCTCCTTACCAATT
TGAACTCTGAAGACAAGGGAAAAAAAATCAGGAGTAAGGTAGACAATGTC
AGGAATGAGAATTCTACACTGAATCACAAGGAGACAGAGAGGTCAAGGAT
TTGGGAATGCTTGTTTATTTGCCACCCCCCATTTGTCTCCCTCTACTGCC
GTGGTTCTCAACCTACCTAGTGCTGTGACCCTTTAGTACAGCTCTTCACG
TTGTCTTAACCCCCGGCTATAACATTATTTTTGTTGCTACTTTCTAACTG
TAACTTTGCTACCTTTATGAATCACAATGTAAATATCTGTGTTCTCTGAT
GGTCTTAGGTGATCCTGTTGAAAGGGTCATTTGACCCTCCCATAGGAGTT
GCAACCTGCAAGTTGGTAACTGCTTATCTGCAGGGCAAGCATTTAGATGA
TGTTAACTGTAAGACCTTATACCTTTGCCTTTAAGGCACTTTTGGTATAG
CTAGAAAAACTAATTCTACT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTGCCACACGAAATTCTTTCCAGCTCCTGGCTATTATAAAT
AAGGCTGCTATGATTTTACCCCAACATGTGTCATTATTACATGTTGGAGC
ATCTTCTGGGTATATGCCCAGGAGTGGTATAGTTGGGTCCTCAGGTAGTA
CTATGTCCAATTTTCTGAGGAACCACCAAACTGATTTCTAGAGTCAAACC
CCAAATTTTATTCTTACATTCTTTTTTCCTTAAGTAACTTCTTAATCACA
AAATTAGTCATTATATTCCTAAAATACAATATCAAATAGAGTCGTCTACA
AAATTGATAATACTTTCAAAATTTCTAGCAAGAACTGAAACTCATCGGTT
TTTTCTAGATATGTCATATTAAAATATCCCTCAGTGAGCCTGAGGATGTA
CTCAGCAGTAGAGTATTCGCCTTGGGCTTAACTAAAACAAAGTTGAATAT
GCTTCCAGTGGGGCTGGTGAGTCTTAGGGAGCCCTCTTCTAAGTTCTCTG
AAAAATAAAATAAAATCATTAAAAATCTTTTTTCAGATAGTCTGTTATAC
CTAAAAGTGTCCTATTGTAGTCTATGCTCTATCCCAACACAGAAATGAGA
ATGTACATAAATCTGTTATGCATTTAAAATTTGGAGAAAAAAAAGAAAGC
TACCCAAATGGGAGAGCACAGGTG

Query= MSMg01no173_l11.g1 MSMg01no173_l11.g1 CHROMAT_FILE:
MSMg01no173_l11.g1 PHD_FILE: MSMg01no173_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:26 2005
         (601 letters)



>mm_chr2_79448895_79449900
          Length = 1006

 Score = 1015 bits (525), Expect = 0.0
 Identities = 586/611 (95%), Gaps = 12/611 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatgtgtcattattacatgttggagcatcttctgggtatatgcccaggagtggtatagt 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 930 acatgtgtcgttattacatgttggagcatcttctgggtatatgcccaggagtggtatagc 871

                                                                       
Query: 61  tgggtcctcag---gtagtactatgtccaattttctgaggaaccaccaaactgatttcta 117
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tgggtcctcaggtagtagtactatgtccaattttctgaggaaccaccaaactgatttcta 811

                                                                       
Query: 118 gagtcaaaccccaaattttattcttacattcttttttccttaagtaacttcttaatcaca 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gagtcaaaccccaaattttattcttacattcttttttccttaagtaacttcttaatcaca 751

                                                                       
Query: 178 aaattagtcattatattcctaaaatacaatatcaaatagagtcgtctacaaaattgataa 237
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||
Sbjct: 750 aaattagtcattatattcctaaaatacaatatcaaatagagtaatctacaaaattgagaa 691

                                                                       
Query: 238 tactttcaaaatttctagcaagaactgaaactcatcggttttttctagatatgtcatatt 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tactttcaaaatttctagcaagaactgaaactcatcggttttttctagatatgtcatatt 631

                                                                       
Query: 298 aaaatatccctcagtgagcctgaggatgta-ctcagcagtagagtattcgccttgggctt 356
           |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 630 aaaatatccctcagtgggcctgaggatgtagctcagcagtagagtatttgccttgggctt 571

                                                                       
Query: 357 aactaaaacaaagttgaatatgcttccagtggggctggtgagtcttagggagccctcttc 416
           ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 570 aactaaaacaaagttgaatatgctttcagtggggctggtgagtcttagcgagcccccttc 511

                                                                       
Query: 417 taagttctctgaaaaataaaataaaatcattaaaaatcttttttc--agatagtctgtta 474
           ||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||
Sbjct: 510 taagttctctgaaaaataaaataaaatcattaaaaatctttttttttagacagtctgtta 451

                                                                       
Query: 475 tacctaaaagtgtcctatt----gtagtctatgctctatcccaacacagaaatgagaatg 530
           |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 450 tacctaaaagtgtcctattaaaagtagtctatgctctatcccaacacagaaatgagaatg 391

                                                                       
Query: 531 tacataaatctgttatgcatttaaaatttggagaaaaaaaagaaagctacccaaatggga 590
           |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||
Sbjct: 390 tacataaatctgttatgcatttaaaatttggagaaaaaa--ggaagctacccaaatggga 333

                      
Query: 591 gagcacaggtg 601
           |||||||||||
Sbjct: 332 gagcacaggtg 322


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1006
Length adjustment: 10
Effective length of query: 591
Effective length of database: 996
Effective search space:   588636
Effective search space used:   588636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)