Query= MSMg01no174_a11.b1 MSMg01no174_a11.b1 CHROMAT_FILE:
MSMg01no174_a11.b1 PHD_FILE: MSMg01no174_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:48 2005
(270 letters)
>mm_chr2_154145754_154146423
Length = 670
Score = 485 bits (251), Expect = e-142
Identities = 263/267 (98%), Gaps = 2/267 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccttcaaactccctctatcatagtctacattctccagggcattcactggcaga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccttcaaattccctctatcatagtctacattctccagggcattcactggcaga 264
Query: 65 tgtctgctccccatccctgaagcagtgctatggtgatctggtggggacagatgaggtggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtctgctccccatccctgaagcagtgctatggtgatctggtggggacagatgaggtggc 324
Query: 125 agttatcacgcctgcagtcaacttccagggctaaaggcagaaactattgtctttctctcc 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttatcacgcctgcagtcaactcccagggctaaaggcagaaactattgtctttctctcc 384
Query: 185 cctcagattgaccttcagngc-gcaagctgaagccactactgaaccccaagtactgaatg 243
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctcagattgaccttcag-gcagcaagctgaagccactactgaaccccaagtactgaatg 443
Query: 244 acagcaaacccctgagaattgtctcca 270
|||||||||||||||||||||||||||
Sbjct: 444 acagcaaacccctgagaattgtctcca 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_a11.g1 MSMg01no174_a11.g1 CHROMAT_FILE:
MSMg01no174_a11.g1 PHD_FILE: MSMg01no174_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:48 2005
(229 letters)
>mm_chr2_154280059_154280687
Length = 629
Score = 443 bits (229), Expect = e-129
Identities = 229/229 (100%)
Strand = Plus / Minus
Query: 1 tagcttgcccacccaggcatgtgaggctgggagagcgcctttcacaccacccgcacaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tagcttgcccacccaggcatgtgaggctgggagagcgcctttcacaccacccgcacaagc 370
Query: 61 ctctcatttatgctacaggcttcagtgatcatgtgcttttgttccccacaggaacacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctctcatttatgctacaggcttcagtgatcatgtgcttttgttccccacaggaacacacc 310
Query: 121 aagtccaatgtaactccagacattatttaggaaggcccagaaggaatattgaagcagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aagtccaatgtaactccagacattatttaggaaggcccagaaggaatattgaagcagttt 250
Query: 181 caaatgtagatctgcaagatgttatttatataatggggcaatagtccaa 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caaatgtagatctgcaagatgttatttatataatggggcaatagtccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
