Query= MSMg01no174_c24.b1 MSMg01no174_c24.b1 CHROMAT_FILE:
MSMg01no174_c24.b1 PHD_FILE: MSMg01no174_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:00 2005
(253 letters)
>mm_chr2_102016382_102017033
Length = 652
Score = 400 bits (207), Expect = e-116
Identities = 228/235 (97%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 19 gaattctcttgtgccttagtccgactgtgatttctgacaagtagcaaactgtgcagatga 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gaattctcttgtgccttagtccgactgtgatttctgacaagtagcaaactgtgcagatga 393
Query: 79 ggctgtctctgtcctgccgcgtggccacaaaggggggggggcagccacggagcttattct 138
|||||||||||||||| | ||||||||||| | ||| ||||||||| ||||||||||||
Sbjct: 392 ggctgtctctgtcctggagagtggccacaaa-gagggagggcagccatggagcttattct 334
Query: 139 ggagctggagggaagtagaatttatgaatagcttgatttagaagactcgtaaacccaagg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggagctggagggaagtagaatttatgaatagcttgatttagaagactcgtaaacccaagg 274
Query: 199 tgccagtttccaggtggcaacggagtacttgtgtgtgtgttggcaggaagaaatg 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgccagtttccaggtggcaacggagtacttgtgtgtgtgttggcaggaagaaatg 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 652
Length adjustment: 9
Effective length of query: 244
Effective length of database: 643
Effective search space: 156892
Effective search space used: 156892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_c24.g1 MSMg01no174_c24.g1 CHROMAT_FILE:
MSMg01no174_c24.g1 PHD_FILE: MSMg01no174_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:00 2005
(292 letters)
>mm_chr2_101832450_101833141
Length = 692
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%)
Strand = Plus / Plus
Query: 1 catcccaacctgatcaagtctgttttctatccttccaaatttctggtgcttcctcaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 catcccaacctgatcaagtctgttttctatccttccaaatttctggtgcttcttcaaaaa 260
Query: 61 tggcagcctcctgacagttgtcttagcttggctctttgcttaatgtttaataatgtcagt 120
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 261 tggcagcctcctgacaattgtcttagcttggctctttgcttaatgtttaacaatgccagt 320
Query: 121 ttttcttaatttcgaaaaaaaaaacctagaagcagtcatgactaactgatggcctagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcttaatttcgaaaaaaaaaacctagaagcagtcatgactaactgatggcctagaag 380
Query: 181 cagtcatgactaactgatggtcactgcaggaatgtctttccaagaatgcaggactcggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtcatgactaactgatggtcactgcaggaatgtctttccaagaatgcaggactcggca 440
Query: 241 gatgaaggggaaggtactctgggctgtttaggcttgcttacagaatggtgt 291
||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gatgaaggggaaggtacactgggctgtttaggcttgcttacagaatggtgt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
