Query= MSMg01no174_f21.b1 MSMg01no174_f21.b1 CHROMAT_FILE:
MSMg01no174_f21.b1 PHD_FILE: MSMg01no174_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:13 2005
(319 letters)
>mm_chr2_32678048_32678767
Length = 720
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 4 ggaattctggtgtctacaaagtcctgcctaaaggacagggtgacagagagacatgccagc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggtgtctacaaagtcctgcctaaaggacagggtgacagagagacatgccagc 263
Query: 64 gagttcccaccagatggcctcccctctagaacctgggagaaccgaaacagaagcgccaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagttcccaccagatggcctcccctctagaacctgggagaaccgaaacagaagcgccaga 323
Query: 124 actgagcttcaaagtcctccttggccagtcagcttccatgcccagtgaacctgggcatgt 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 actgagcttcaaagtcctccttggccagtcagctcccatgcccagtgaacctgggcatgt 383
Query: 184 gtgggctcttgactccagggaaatctgaaccaagtgggcagtgcagccc-tccaacagcc 242
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 gtgggctcttgactccagggaaatctgaaccaagtgggcagtgcagcccctccaacagcc 443
Query: 243 catgaggaagttccgagagtcccactagctcctggccagagtgacgctgacctcagagga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catgaggaagttccgagagtcccactagctcctggccagagtgacgctgacctcagagga 503
Query: 303 cctttgcctgctgagcc 319
|||||||||||||||||
Sbjct: 504 cctttgcctgctgagcc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_f21.g1 MSMg01no174_f21.g1 CHROMAT_FILE:
MSMg01no174_f21.g1 PHD_FILE: MSMg01no174_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:13 2005
(189 letters)
>mm_chr2_32820869_32821458
Length = 590
Score = 337 bits (174), Expect = 3e-97
Identities = 180/182 (98%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 1 gaattaaacctgggccttctacacgagaaacaaaacagccaaatattgtttgaagccaaa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaattaaacctgggccctctacacgagaaacaaaacagccaaatattgtttgaagccaaa 323
Query: 61 aagagaagtggactcaatgaggtaagtctgaggttagtgccttgttccactgtgcagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagagaagtggactcaatgaggtaagtctgaggttagtgccttgttccactgtgcagctg 263
Query: 121 ttatttctacttgagttaaccttatgctgttttagttaagtgacctttttt-tggggggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 ttatttctacttgagttaaccttatgctgttttagttaagtgaccttttttctggggggg 203
Query: 180 gg 181
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 590
Length adjustment: 8
Effective length of query: 181
Effective length of database: 582
Effective search space: 105342
Effective search space used: 105342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
