Query= MSMg01no174_h14.b1 MSMg01no174_h14.b1 CHROMAT_FILE:
MSMg01no174_h14.b1 PHD_FILE: MSMg01no174_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:21 2005
(695 letters)
>mm_chr2_64657389_64658482
Length = 1094
Score = 1261 bits (652), Expect = 0.0
Identities = 682/692 (98%), Gaps = 1/692 (0%)
Strand = Plus / Plus
Query: 4 ggaattctaagtgttggaactgacaaattggaattactactaataactcataaataggct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaagtgttggaactgacaaattggaattactactaataactcataaataggct 263
Query: 64 aagctgaggctggagaaatgtctcagcagttgagaacactggttgcctttgaaagagacc 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 aagctgaggctggagaaatgtctcagcagttgagaacactggttgcttttgaaagagacc 323
Query: 124 tgagttcagttcatggccatctatagctcccgtttcagggtatccaatggcagcttcagc 183
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 cgagttcagttcatggccagctatagctcccatttcagggtatccaatggcagcttcagc 383
Query: 184 ctctgcaggcaccaggcacacatgtggtgcacaggcatgcaggcaggaaaaacagccata 243
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 ctctgcaggcaccaggcacacatgtggtgcacaggcatgcaggcaggcaaaacagccata 443
Query: 244 gacctaaaataaaattttaaaataagataattaaataagctaagagtggtagaattgtgc 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 gacctaaaataaaattttaaaataaaataattaaataagctaagagtggtagaattgtgc 503
Query: 304 tacactgaataagaaacttatctagctgacgccgagcaaaaactgttcaaaaataaagct 363
|||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct: 504 tacactgaataagaaacttatccagctgaagt-gagcaaaaactgttcaaaaataaagct 562
Query: 364 gccgcttccatttcccgaagaaggggcgggtggctttaccaggctcagaacatcgaaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gccgcttccatttcccgaagaaggggcgggtggctttaccaggctcagaacatcgaaaat 622
Query: 424 agtttcctaatggaacattttagtatatacctggatgattgttcttcctctcatgggtag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agtttcctaatggaacattttagtatatacctggatgattgttcttcctctcatgggtag 682
Query: 484 atttgacaacttcaatttcttaatgtagctgttagaaacccacgttcatcacactcctgc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atttgacaacttcaatttcttaatgtagctgttagaaacccacgttcatcacactcctgc 742
Query: 544 ctctatgtttagttaaagccctccacagccttaaaatgggaaccaaatgtctcctgtcaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctctatgtttagttaaagccctccacagccttaaaatgggaaccaaatgtctcctgtcaa 802
Query: 604 gaacgagtcttagcacatagtaatataaccaaatgttacaatttatcttttgactgccct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gaacgagtcttagcacatagtaatataaccaaatgttacaatttatcttttgactgccct 862
Query: 664 ggaattttcctgtcagggtgctatttctaact 695
||||||||||||||||||||||||||||||||
Sbjct: 863 ggaattttcctgtcagggtgctatttctaact 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space: 742540
Effective search space used: 742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_h14.g1 MSMg01no174_h14.g1 CHROMAT_FILE:
MSMg01no174_h14.g1 PHD_FILE: MSMg01no174_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:21 2005
(286 letters)
>mm_chr2_64767836_64768520
Length = 685
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 agcactagtcacgtttatatgtcactggcaggaaaaaaaaaacacggagcgccaactccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agcactagtcacgtttatatgtcactggcaggaaaaaaaaaacacggagcgccaactccc 426
Query: 61 tatggattctgcttaaaggtacaggcttaatgttttgatagatgagtaaagcaagcctca 120
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatggattctgcttaaaggtac-tgcttaatgttttgatagatgagtaaagcaagcctca 367
Query: 121 gcctcttaggtaatcttgagtttctttcgatttcttttgaaaagagctagagttctcgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcctcttaggtaatcttgagtttctttcgatttcttttgaaaagagctagagttctcgta 307
Query: 181 tgtataggagaattttagtggcttttatttcaacaggtgttaccttcgagatatgcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgtataggagaattttagtggcttttatttcaacaggtgttaccttcgagatatgcatta 247
Query: 241 acaataaataatatgctgtggccttctagcctaacaaagcaggagg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acaataaataatatgctgtggccttctagcctaacaaagcaggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
