Query= MSMg01no175_e11.b1 MSMg01no175_e11.b1 CHROMAT_FILE:
MSMg01no175_e11.b1 PHD_FILE: MSMg01no175_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:19 2005
(312 letters)
>mm_chr2_97037558_97038269
Length = 712
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 5 gaattcttacaaattacttatgcattcaagtatatgtgtcacatatcagatctgacctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaattcttacaaattacttatgcattcaagtatatgtgtcacatatcagatctgacctga 453
Query: 65 taatactgttagtcctcaacacataaaatttgtccattagaaagattgctattatcattt 124
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taatactgtttgtccccaacacataaaatttgtccattagaaagattgctattatcattt 393
Query: 125 ttcctaatattaatctccttattaaaagacctattggtaagacctataggtaacaagctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttcctaatattaatctccttattaaaagacctattggtaagacctataggtaacaagctt 333
Query: 185 attgcaggctttaactaagaaatatattacttactttcttactcactttattaattaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 attgcaggctttaactaagaaatatattacttactttcttactcactttattaattaatt 273
Query: 245 gacatcccagagaaatgcatttataaaaatactttcacctctcttttagaaataaaaccc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 272 gacatcccagagaaatgcatttataaaaatactttcacctctcttttagaaataaaacac 213
Query: 305 agaaaaac 312
||||||||
Sbjct: 212 agaaaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_e11.g1 MSMg01no175_e11.g1 CHROMAT_FILE:
MSMg01no175_e11.g1 PHD_FILE: MSMg01no175_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:20 2005
(534 letters)
>mm_chr2_96912650_96913583
Length = 934
Score = 994 bits (514), Expect = 0.0
Identities = 529/534 (99%), Gaps = 1/534 (0%)
Strand = Plus / Plus
Query: 1 tttatttaggtctgagccccatttttttaatggggttatttgatttttctggagtccacc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tttatttaggtctgagcccca-ttttttaatggggttatttgatttttctggagtccacc 260
Query: 61 ttcttgagttctttatatatattggatattagtcccctatctgatttaggataggtaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttgagttctttatatatattggatattagtcccctatctgatttaggataggtaaag 320
Query: 121 atccttttccaatctgttggtggtgtttttttcttattgatggtgtcttttgccttacag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 atccttttccaatctgttggtggtgtttttttcttattgacggtgtcttttgccttacag 380
Query: 181 aagctctgcagtgaaatctatattcttgtcccatagccacccatcactaagtacatggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagctctgcagtgaaatctatattcttgtcccatagccacccatcactaagtacatggac 440
Query: 241 tcttatgtatgtttcctgcttaaatttaatttataaaaatattaaacctgttagtaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttatgtatgtttcctgcttaaatttaatttataaaaatattaaacctgttagtaagat 500
Query: 301 atatgtaaaaatttaaaatatatattttaaaattaagtaccacaagattacatatcttat 360
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 501 atatgtaaaaatttaaaatatatattttaaaattaagtaggataagattacatatcttat 560
Query: 361 tttatacaacatttaaaagtcaataatggcttcaatgtcgtcaaatcaatacccctcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttatacaacatttaaaagtcaataatggcttcaatgtcgtcaaatcaatacccctcaag 620
Query: 421 aactatgaaaggttgtactgataattgagtagtattctgtaaggatggtagtgtgaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactatgaaaggttgtactgataattgagtagtattctgtaaggatggtagtgtgaaact 680
Query: 481 cagaaatgtgtgtattttttacacaaaagtaatccactattgtcctaaaatctc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagaaatgtgtgtattttttacacaaaagtaatccactattgtcctaaaatctc 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
