CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATCTTTCCCCAATTACCAAACTTGATCTAATATGGAATTGGCTGTT
TTTTCACATACTTTTTAAGTTGCAAAAATACACATCAACATAGAGATAAC
ATATGTGTTCCTCATAATCAAAATATCCCCCTTCTGTTTTTCTCTTACTA
GCAAATGTTTCTTACTATCAAACTTTAAACCTTGTGGTCTAAAGTAGATC
CTAGGTAGAACAAAAGAAATGGAAATTGTAAACTAGAGCTACATTTACTA
AGTATATAATTGAACTGAAACATTTGCTTTAATTTTCACTAGAAAACAGA
TATTATGATACTTTGAACCGTTTGTATTTAATAGAATTCTTGATGTGAAA
TACATATACCATTGGAGTTAAAGAGAGAGTCTTGCTTCCTATGGTAAGGT
TCTTTATGGCTTCTGTGCTTTCCTTCTGCCTCATGCATATGCATAATTTG
CATATGCATATGCCCTCCTTGGGGATTTTGCTTCTAAGTATGACAGAAAG
ATAAAATCCTGGTTAATGAAATGTGTATGACAGAACCATTCACTGTCCCA
GAGCTGAACAAAAACTGATCTGAAGTACAAACTTATGTTTCTTAAAGAAA
TTATCACTTTAATTTAAGGTAGCATTTCCCTAAGTCTGAAAN

CCCCCTGCCNNNNNNCCAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCCCCGAGAAATTCAAACT
GAGCGGACATGGAATTGATTGCAGTGCAATTATTTTGACCACACGCCATG
AGTGAGCATATACTAACAAAGACTGTGGAAGTGAAATTTGGCATTCGCGC
GATAGGTGAACATTAGGAAATAATGTCCTAACCGCACAGAAAATTCCCTA
GAGTGGAACAGAAAATCTGGAGGAGTCCTGATCCATCACCTAAATGAGTG
ATCACCATCACAAAAAGGAAACCACTACTGTCCTTTCCAATCCTTCCACA
CAATAATTTCTGCAGGGATAAATTTTATTTACCCCCCCCCCCCACCAACA
TGATATTCTAGAATATACTAGAAGACCCGCTACACAAAAAAGAAAAAAAG
AACCCGCATGGATCGTAGCACTAATACAAGATGGACTGCTCCAATGAATA
CCGAACAATATGAAGGCCTCCCAAGAGATCAACTGAAGTCAGGGGAACAG
ATCAACAGTGTCTTTGCGCATGTGAAGAAGCACCTGATGGATCTACCAAA
AGGCAATGAGATACAGCCAGTGACCCAGGCCTACCAGGAGATCTGATCTA
ACCCATGGACAAGAGAGGCAGATTACTAAAACTTACCAAATGAACAAACA
CCAGGN

Query= MSMg01no175_n16.b1 MSMg01no175_n16.b1 CHROMAT_FILE:
MSMg01no175_n16.b1 PHD_FILE: MSMg01no175_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:01 2005
         (613 letters)



>mm_chr2_55669506_55670518
          Length = 1013

 Score = 1131 bits (585), Expect = 0.0
 Identities = 603/609 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatctttccccaattaccaaacttgatctaatatggaattggctgttttttcaca 64
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gaattcatcactccccaattaccaaacttgatctaatatggaattggctgttttttcaca 754

                                                                       
Query: 65  tactttttaagttgcaaaaatacacatcaacatagagataacatatgtgttcctcataat 124
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 753 tactttttaagttgcaaaaatacacatcaatatagagataacatatgtgttcctcataat 694

                                                                       
Query: 125 caaaatatcccccttctgtttttctcttactagcaaatgtttcttactatcaaactttaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caaaatatcccccttctgtttttctcttactagcaaatgtttcttactatcaaactttaa 634

                                                                       
Query: 185 accttgtggtctaaagtagatcctaggtagaacaaaagaaatggaaattgtaaactagag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 accttgtggtctaaagtagatcctaggtagaacaaaagaaatggaaattgtaaactagag 574

                                                                       
Query: 245 ctacatttactaagtatataattgaactgaaacatttgctttaattttcactagaaaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctacatttactaagtatataattgaactgaaacatttgctttaattttcactagaaaaca 514

                                                                       
Query: 305 gatattatgatactttgaaccgtttgtatttaatagaattcttgatgtgaaatacatata 364
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gatataatgatactttgaaccgtttgtatttaatagaattcttgatgtgaaatacatata 454

                                                                       
Query: 365 ccattggagttaaagagagagtcttgcttcctatggtaaggttctttatggcttctgtgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccattggagttaaagagagagtcttgcttcctatggtaaggttctttatggcttctgtgc 394

                                                                       
Query: 425 tttccttctgcctcatgcatatgcataatttgcatatgcatatgccctccttggggattt 484
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 393 tttccttctgcctcatgcatatgcataatttgcatatgcatatgcccttcttggggattt 334

                                                                       
Query: 485 tgcttctaagtatgacagaaagataaaatcctggttaatgaaatgtgtatgacagaacca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgcttctaagtatgacagaaagataaaatcctggttaatgaaatgtgtatgacagaacca 274

                                                                       
Query: 545 ttcactgtcccagagctgaacaaaaactgatctgaagtacaaacttatgtttcttaaaga 604
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttccctgtcccagagctgaacaaaaactgatctgaagtacaaacttatgtttcttaaaga 214

                    
Query: 605 aattatcac 613
           |||||||||
Sbjct: 213 aattatcac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)