ATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGCCCAGAGCTCCAACCCAAGCTGTGCCTGTGCCTGTGTACTAT
ACATAGTTTGGCATTACAAAGACTGATGCTCTGACAAAACTTTCTCCTTG
ACCAAGAGTTTAGTCAGACTAGACCACACCTTTGTGTTGCCCAATTTTAT
CCAAAAATCCTACTGAGCCAGTTTAGCAAGAATCCCTGCCTTCAATATCT
GATCGAATTCATCATCTTCTACCCTGCCGTTGAAGTATGACTGTTCTGAT
GTCTCGAGCATCCTACCAAGCTGGTGTAGCCAGAATCCTTCCCACGATGT
TTCCTCTTGAGTTATTTTCCATCCACTCGCGCCCCACCTTGTTCCTGAGC
TTGAGTCCCACTAACCCTCACCGCATCACACTCCCTCCCAGTTTTATAGA
GAGGCCTCTTCTCCATTGCAATACTTCCCATTAAAATTCTGTTTTAACAC
TGTAACATCTGTGCATCTCTGATTTCTTTTTCTACTTTGTTTTTTAAATT
TATAATGTGTGAAATGTATGGATGTATAGATGCATGTGTGGGGGCCTGCG
TGTGTATGCCAGTGACTCATTAAAGAAAATGTACACATATATGTGGAGGC
CTGAGTTGACATGTGGATGTCTTCCTCCATCACTCTCCACTTTATTTACT
GAGGCAGGGTCTCTCACTGTG

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTCTCGAGGAATGCGCGGGGATACGGCGGCCTATACTTTCT
TTATGTTATTTTATTTTATTCCCCCTTTATTTTATTTTTTAGTGTATTTT
AGTATTTTTATTTATTTATTTATTTCTTCCTTCCCGGCCCCCCCCCCCCC
CCCGCTCCCCCTTGGGGGGGGGGGCCGCGGCGCGGGGCGGGGGGCGCCCG
GCGGGCCCCCGCCCCCGGGCCGCGCCAGGCGCCGGGGGGTCACCCCCCCC
CGCGCGCGCCGGCCCGGGCCCCGTGTTGTTGTGGTTGCGCGGGCGGGCCG
GCGCGGGGCCCCTGGGCCCGGGCCGCCGCCCCCCCCCCCGCCCGCCCCCC
CCCCGGGCCGGCGGCCGGGCGCGCGGGCGGGGGGGGGGGGCCCCCCCGGG
GGGCTCTCGCCGCCGGGGGGGGGGTGCGCCCGGGCGGCCCCCGCCTTTGC
GCGCGGCGCGCGCCGCGCCGCTTCCGGCGGTGTGGCGTGCCCGGGCCGGG
CCGCGGGGGGCGCCGCCCCCCCGCCGGCGGCGCGCCGCACGGGGTGTGCC
GGCGGCCGCGGCGGGTGGGGGGGGGCGGGCNGGTCGCCGGGCGCGGGCGG
CCCGCGCGGGGGCGGCGGGGGGGGGGGGCGGGGGGGCGGCGCGCGCGGCG
CGGCGGGGCGCCGCCCCCCGCGCCGGCCGCTCCGGCCGCGCGCGGGCGGG
CGGGGGGCGGGGCGCGCCGGGCGGCGCGGCCGCGCGGGCGGCCGGGGGCG
GGCCGCCGCGGCCCGCCGGGTCGGCGGGGTGGCGCCCCGCGGCGGCG

Query= MSMg01no175_o05.b1 MSMg01no175_o05.b1 CHROMAT_FILE:
MSMg01no175_o05.b1 PHD_FILE: MSMg01no175_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:04 2005
         (673 letters)



>mm_chr2_17799571_17800643
          Length = 1073

 Score = 1178 bits (609), Expect = 0.0
 Identities = 656/673 (97%), Gaps = 5/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgcccagagctccaacccaagctgtgcctgtgcctgtgtactatacatagttt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctgcccagagctccaacccaagctgtgcctgtgcctgtgtactatacatagttt 262

                                                                       
Query: 64  ggcattacaaagactgatgctctgacaaaactttctccttgaccaagagtttagtcagac 123
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 263 ggcattacaaagactgatgctctgacaaaactttctccttgaccaagattttagtcagac 322

                                                                       
Query: 124 tagaccacacctttgtgttgcccaattttatccaaaaatcctactgagccagtttagcaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tagaccacacctttgtgttgcccaattttatccaaaaatcctactgagccagtttagcaa 382

                                                                       
Query: 184 gaatccctgccttcaatatctgatcgaattcatcatcttctaccctgccgttgaagtatg 243
           ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 383 gaatccctgccttcaatatctgatcaaattcatcatcttctaccctgccattgaagtatg 442

                                                                       
Query: 244 actgttctgatgtctcgagcatcctaccaagctggtgtagccagaatcct---tcccacg 300
           | ||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||
Sbjct: 443 attgttctgatgtcttgagcatcctaccaagctggtgtagccagaatcctccttcccacg 502

                                                                       
Query: 301 atgtttcctcttgagttattttccatccactcgcgccccaccttgttcctgagcttgagt 360
           |||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 503 atgttttctcttgagttattttccatccact-g-gtcccaccttgttcctgagcttgagt 560

                                                                       
Query: 361 cccactaaccctcaccgcatcacactccctcccagttttatagagaggcctcttctccat 420
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccactaaccctcactgtatcacactccctcccagttttatagagaggcctcttctccat 620

                                                                       
Query: 421 tgcaatacttcccattaaaattctgttttaacactgtaacatctgtgcatctctgatttc 480
           |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 tgcactacttcccattaaaattctgttttaacacagtaacatctgtgcatctctgatttc 680

                                                                       
Query: 481 tttttctactttgttttttaaatttataatgtgtgaaatgtatggatgtatagatgcatg 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 tttttctactttgttttttaaatttataatgtgtgaagtgtatggatgtatagatgcatg 740

                                                                       
Query: 541 tgtgggggcctgcgtgtgtatgccagtgactcattaaagaaaatgtacacatatatgtgg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtgggggcctgcgtgtgtatgccagtgactcattaaagaaaatgtacacatatatgtgg 800

                                                                       
Query: 601 aggcctgagttgacatgtggatgtcttcctccatcactctccactttatttactgaggca 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aggcctgagttgacatgtggatgtcttcctccatcactctccactttatttactgaggca 860

                        
Query: 661 gggtctctcactg 673
           |||||||||||||
Sbjct: 861 gggtctctcactg 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)