Query= MSMg01no176_i05.b1 MSMg01no176_i05.b1 CHROMAT_FILE:
MSMg01no176_i05.b1 PHD_FILE: MSMg01no176_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:21 2005
(633 letters)
>mm_chr2_60398683_60399715
Length = 1033
Score = 1139 bits (589), Expect = 0.0
Identities = 622/633 (98%)
Strand = Plus / Plus
Query: 1 cagatctctcccagcatttattaaacacttaagagtgtgttcaaaatattattttatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatctctcccagcatttattaaacacttaagagtgtgttcaaaatattattttatgtt 260
Query: 61 atgatttagcaacactgcagtactttcataatgcccaccattgctgaagtacttagaggt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgatttagtaacactgcagtactttcataatgcccaccattgctgaagtacttagaggt 320
Query: 121 gaaaattcactgggcagagggccagttttagcagcaaattaataaatgagcttttttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaattcactgggcagagggccagttttagcagcaaattaataaatgagcttttttacc 380
Query: 181 atagtccaaacagcaatttatatcaatttaactcaattaacagcattcccagcacgtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagtccaaacagcaatttatatcaatttaactcaattaacagcattcccagcacgtggt 440
Query: 241 gctcagccagaaaaaaagttccacccagtcagaagttttttgcaagcctctgtcttggtt 300
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gctcagtcagaaaaaaagttccacccagtcagaagtttccagcaagcctctgtcttggtt 500
Query: 301 ggttgtgcacaagatatcttgggtacttttcatgcccccattcccacccttacgtgcaac 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 ggttgtgcacaagatatcttgggtacttttcatgcccccattcccacccttatgtgcaac 560
Query: 361 ttcctatacacaacttagctatgtgagtgaaaaagttgagctcacccagacagtgccctc 420
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ttcctgtacacaacttagctatgtgagtgaaaaagttgagctcacccagatagtgccctc 620
Query: 421 cagccacatgtgtttctgaagctcatacaggtgcagtcaaacttagttctaccagtgacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagccacatgtgtttctgaagctcatacaggtgcagtcaaacttagttctaccagtgacc 680
Query: 481 agaaatggtgcagagcttctgaggccaccagtagtcacccagcccctcagccccttagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 agaaatggtgcagagcttctgaggccaccagtagtcacccagcccctcagcccctcagcc 740
Query: 541 cctcagcccctcagcccctcagcccctcaccccctcagcccctcagcccctcagcccctc 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 cctcagcccctcagcccctcagcccctcagcccctcagcccctcagcccctcagcccctc 800
Query: 601 agcccctcagcccctcagcccctcagcccctca 633
|||||||||||||||||||||| ||||||||||
Sbjct: 801 agcccctcagcccctcagccccccagcccctca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_i05.g1 MSMg01no176_i05.g1 CHROMAT_FILE:
MSMg01no176_i05.g1 PHD_FILE: MSMg01no176_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:21 2005
(297 letters)
>mm_chr2_60568948_60569644
Length = 697
Score = 545 bits (282), Expect = e-160
Identities = 294/298 (98%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 gggaatgcccagtgtctgtttgtttttgagagacag-aggggattggctctggatgagaa 59
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 582 gggaatgcccagtgactgtttgtttttgagagacagaaggggattggctctggatgagaa 523
Query: 60 gcgaggtgaggaggaagtgggaggaaaatgtcctaaggatctaacgtcagaggccttcca 119
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 522 gcgaggtgaggagggagtgggaggaaaatgttctaaggatctaacgtcagaggccttcca 463
Query: 120 tgggacttcgaatcacctttctgtcattacttataagtgaggggaaaatggcacatcagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgggacttcgaatcacctttctgtcattacttataagtgaggggaaaatggcacatcagc 403
Query: 180 ttgacacatgggcagcaacaggttttctttagattattacagcatttagttgacactgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttgacacatgggcagcaacaggttttctttagattattacagcatttagttgacactgag 343
Query: 240 gcagatggaaatttattggggacttttgaatagaacctctctctgttcagctggtaga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcagatggaaatttattggggacttttgaatagaacctctctctgttcagctggtaga 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
