CATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACATGATATCGCACTCACTGATAAGTGGATATTAGCCCAAAAG
CTTAGAATACCCAAGATACAATTTCCAAAACACATGAAACTCAAGCAGAA
GGAAGACCAAAATGTGGATACCTCACCCTTTCTTAAAATTGGGAACACTC
GTAGGCTTTGGATGAAGACTTAGAACTCTCATCTCTGCATGTGCCATGCC
TTCCTGTGTGCTGCCCTGCTCCCACCTTGATAATGGTGGACTGAACCTCT
GACCTGCAAGCCAGCCCCATTTAAATGTTGTCCTTTGTAAGACTTGCCTT
GGTCATGGTATCTGTTCACAGCAGTAAAACCCTAAGACAGAAGTTGGTAT
CAGGGACAGGGGTATTGCTGTGATATGTGACCATGCTTTTGTTTGGAAGA
ATGTGAATTTGGGGACTTTGGATTTGGAAAGCAGCGGAATGCTTTACATG
GGGTTTAATGGTCCACCCTGATAGGAATATGGAAGACTTTGCCACTGAGA
GCGATTTGAATTGTGTGGACCTAGCCCAAGAGATTTCAGTGGAGACTTTC
ACTATGTGCCATAGAGACTGTTTTTGTGGTATTTTGGTGAATAATGTGGC
TACATTTGCCCTTGCCTGAAAAGTCTGGCTGAGTCTAAGGTGAATTGACC
CACACTAG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGATTACCAGCAATCACAGGATA
GTCAGGGACATTTACAACACTAGAAGCTACAGGATGCAGAATGACAGAGA
TCTACATGCTCCATCCAGTCTAGCTAAGTAGTAAGTTCTAACTCTAGAGA
AACCTTATTTCAGAAACTAAGATAGAGAGCAATGGTGGAGGACAAATACA
ACCCATGGCCTGCAAGTATATGTGTGCATAACTGCATTTATCATACATAC
CACATATATACATACATACACATACCCTCATATACACTACATATGTGCAC
AAACAGGTACATACATTTACAACACACAAAAGCATACACTTTAAAAATTT
GGAAGGTGGGCATGGTTTCAAAATAGAAGGAGAAAGAGGGATGAAAGACA
AATTACAATAAAGATTTTTTTAAAAATTCATGGAATCATATTACCTATTT
ACATAAAATTACACATAAAATATAATTGGGTGTACATACACACACATACA
CACATATACATATACACATACACATATACATGTCCATATACATACATATA
TATGTATATAAAATGAAGTCCTTCCATTTGCATTTTCAGTGTTCCTCACC
AAAGAGACCGATGATAAAACAAAACCTCAGTACAAGGCTTAGAGTCTTCC
TTTCAAATAGTT

Query= MSMg01no177_c22.g1 MSMg01no177_c22.g1 CHROMAT_FILE:
MSMg01no177_c22.g1 PHD_FILE: MSMg01no177_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:42 2005
         (629 letters)



>mm_chr2_99272907_99273935
          Length = 1029

 Score = 1178 bits (609), Expect = 0.0
 Identities = 625/631 (99%), Gaps = 2/631 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agattaccagcaatcacaggatagtcagggacatttacaacactagaagctacaggatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 agattaccagcaatcacaggatagtcagggacatttacaacactagaagctacaggatgc 882

                                                                       
Query: 61  agaatgacagagatctacatgctccatccagtctagctaagtagtaagttctaactctag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 agaatgacagagatctacatgctccatccagtctagctaagtagtaagttctaactctag 822

                                                                       
Query: 121 agaaaccttatttcagaaactaagatagagagcaatggtggaggacaaatacaacccatg 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 821 agaaaccttatttcagaaactaagatagagggcaatggtggaggacaaatacaacccatg 762

                                                                       
Query: 181 gcctgcaagtatatgtgtgcataactgcatttatcatacataccacatatatacatacat 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 761 gcctgcaagtatatgtgtgcataagtgcatttatcatacataccacatatatacatacat 702

                                                                       
Query: 241 acacataccctcatatacactacatatgtgcacaaacaggtacatacatttacaacacac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 acacataccctcatatacactacatatgtgcacaaacaggtacatacatttacaacacac 642

                                                                       
Query: 301 aaaagcatacactttaaaaatttggaaggtgggcatggtttcaaaatagaaggagaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaaagcatacactttaaaaatttggaaggtgggcatggtttcaaaatagaaggagaaaga 582

                                                                       
Query: 361 gggatgaaagacaaattacaataaagatttttttaaaaattcatggaatcatattaccta 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 581 gggatgaaagacaaattacaataaagattttttaaaaaattcatggaatcatattaccta 522

                                                                       
Query: 421 tttacataaaattacacataaaatataattgggtgtacatacacacacatacacaca--t 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 521 tttacataaaattacacataaaatataattgggtgtacatacacacacatacacacacat 462

                                                                       
Query: 479 atacatatacacatacacatatacatgtccatatacatacatatatatgtatataaaatg 538
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atacatatacacatacacacatacatgtccatatacatacatatatatgtatataaaatg 402

                                                                       
Query: 539 aagtccttccatttgcattttcagtgttcctcaccaaagagaccgatgataaaacaaaac 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aagtccttccatttgcattttcagtgttcctcaccaaagagaccgatgataaaacaaaac 342

                                          
Query: 599 ctcagtacaaggcttagagtcttcctttcaa 629
           |||||||||||||||||||||||||||||||
Sbjct: 341 ctcagtacaaggcttagagtcttcctttcaa 311


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)