Query= MSMg01no177_m01.b1 MSMg01no177_m01.b1 CHROMAT_FILE:
MSMg01no177_m01.b1 PHD_FILE: MSMg01no177_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:22 2005
(626 letters)
>mm_chr2_126455566_126456592
Length = 1027
Score = 1166 bits (603), Expect = 0.0
Identities = 618/625 (98%), Gaps = 5/625 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttttacca---catttcacaagttctaaagttttatattacaagaattgaga 61
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtttta--aatacatttcacaagttctaaagttttatattacaagaattgaga 262
Query: 62 gctcatggcttaagtcccgttatcaagctgtagtattttctattattcggtattcccatg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctcatggcttaagtcccgttatcaagctgtagtattttctattattcggtattcccatg 322
Query: 122 gctgtgtccttactgtgtacagttcaagactatattctttctggacaaaaggtaaaagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctgtgtccttactgtgtacagttcaagactatattctttctggacaaaaggtaaaagca 382
Query: 182 aactggtgttcatggcagctaaacggcttctttgttggtctggatgcgtgtcatggcctc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aactggtgttcatggcagctaaacggcttctttgttggtctggatgcgtgtcatggcctc 442
Query: 242 cagcttctgcctgtaggcctctgcctcctgctccttcttaagcagctgctgtcggtattt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagcttctgcctgtaggcctctgcctcctgctccttcttaagcagctgctgtcggtattt 502
Query: 302 ctgggcctctcggttggcttcatccagctgtttctgaagcgcttctctctcctaatttag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgggcctctcggttggcttcatccagctgtttctgaagcgcttctctctcctaatttag 562
Query: 362 aaaagaaagccgtgttttcaatttttgcacaaatacattcacataatcatgtgtccatca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaagaaagccgtgttttcaatttttgcacaaatacattcacataatcatgtgtccatca 622
Query: 422 aaagaacatggctctgcagtgagtgcggcagctgcctatggcccctctgagacactttat 481
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 623 aaagaacatggctctgcagtgagtacggcagctgcctatggcccctctgagacactttat 682
Query: 482 ctttccaaccaagacacacataaacccccagttctcgtctgaattatgagatggagactg 541
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctttccaaccaagacacacgtaaacccccagttctcgtctgaattatgagatggagactg 742
Query: 542 ttcattaattccaaggaaaatgtttctaatttagaaatatgaataataaaacacaaaacg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttcattaattccaaggaaaatgtttctaatttagaaatatgaataataaaacacaaaacg 802
Query: 602 cacaccggtacttctttatatactg 626
|||||||||||||||||||||||||
Sbjct: 803 cacaccggtacttctttatatactg 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_m01.g1 MSMg01no177_m01.g1 CHROMAT_FILE:
MSMg01no177_m01.g1 PHD_FILE: MSMg01no177_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:23 2005
(338 letters)
>mm_chr2_126602202_126602939
Length = 738
Score = 619 bits (320), Expect = 0.0
Identities = 323/324 (99%)
Strand = Plus / Minus
Query: 15 gctggcctcgaactcagaaatccacctgcctctgcctcccaagtgctgggattaaaggca 74
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gctggcctcgaactcagaaatccacctgcctctgcctcccaagtgctgggattaaaggcg 679
Query: 75 tgcgacacaacacccggctaaaagatttatttttattacacagtgtatgcttgtttgcct 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgcgacacaacacccggctaaaagatttatttttattacacagtgtatgcttgtttgcct 619
Query: 135 gcatgcatatgtgtgtactatgtgcgtgctcagtgcccgagagggccagtaaagggcgtc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcatgcatatgtgtgtactatgtgcgtgctcagtgcccgagagggccagtaaagggcgtc 559
Query: 195 agattccctggaattgcagtgccatgcggtctggatagaagctgtgtactgtgtggagag 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agattccctggaattgcagtgccatgcggtctggatagaagctgtgtactgtgtggagag 499
Query: 255 agggggtctgcagcgtagttttcctctctgatcgtcttgaccacagtgctcagagtgctc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agggggtctgcagcgtagttttcctctctgatcgtcttgaccacagtgctcagagtgctc 439
Query: 315 tgtaagtgaggggtgggtgtggga 338
||||||||||||||||||||||||
Sbjct: 438 tgtaagtgaggggtgggtgtggga 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
