Query= MSMg01no177_n07.b1 MSMg01no177_n07.b1 CHROMAT_FILE:
MSMg01no177_n07.b1 PHD_FILE: MSMg01no177_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:28 2005
(635 letters)
>mm_chr2_146396403_146397437
Length = 1035
Score = 1205 bits (623), Expect = 0.0
Identities = 629/631 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgacatgtcctcatctacccaaatacagtaaggtgtttatgacagtagtcttt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgacatgtcatcatctacccaaatacagtaaggtgtttatgacagtagtcttt 264
Query: 65 atgttagcgccgtctgggctgcacagtgcccaaatgtatggtttgttgacacgctgaatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgttagcgccgtctgggctgcacagtgcccaaatgtatggtttgttgacacgctgaatc 324
Query: 125 cttcaagccaaagatcaacatggctcagaagcaagatttctacgactgccctcctgtctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcaagccaaagatcaacatggctcagaagcaagatttctacgactgccctcctgtctc 384
Query: 185 tggaagtctagagagcagaagaaaagacagagactgggaggtggcaggagctctcggaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggaagtctagagagcagaagaaaagacagagactgggaggtggcaggagctctcggaat 444
Query: 245 acaggaaatactgtctcttttggagtgttgggagctaggttgcggggcagggagtagcga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acaggaaatactgtctcttttggagtgttgggagctaggttgcggggcagggagtagcga 504
Query: 305 tgtgagaggtgatggaatcaggaagaggcggggcctaggaagaggaggttgggtcactga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgagaggtgatggaatcaggaagaggcggggcctaggaagaggaggttgggtcactga 564
Query: 365 atgctatcctgcgagatgctggtctcatggcagttttccctagagttgttataaaagaac 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgctatcctgggagatgctggtctcatggcagttttccctagagttgttataaaagaac 624
Query: 425 caggcttatttctgaatctctctcacttccggttacgtcatgcgattcttgttacgtcgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caggcttatttctgaatctctctcacttccggttacgtcatgcgattcttgttacgtcgt 684
Query: 485 gtgtcatgtgattgttctcttccgctcagctcccaccttgtgagaccaagcttcttgcca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgtcatgtgattgttctcttccgctcagctcccaccttgtgagaccaagcttcttgcca 744
Query: 545 ctctcgccaaaagggcaactgatggggccgctcaatcaatcaacttgttcttttttctta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctctcgccaaaagggcaactgatggggccgctcaatcaatcaacttgttcttttttctta 804
Query: 605 tatttttcccagactaggtattttgtttcca 635
|||||||||||||||||||||||||||||||
Sbjct: 805 tatttttcccagactaggtattttgtttcca 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_n07.g1 MSMg01no177_n07.g1 CHROMAT_FILE:
MSMg01no177_n07.g1 PHD_FILE: MSMg01no177_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:28 2005
(662 letters)
>mm_chr2_146550645_146551706
Length = 1062
Score = 1261 bits (652), Expect = 0.0
Identities = 658/662 (99%), Gaps = 4/662 (0%)
Strand = Plus / Minus
Query: 1 cagggattcagaggtacctactgagaccctgtctcaaacaaacaaacaaacaaacaaaca 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 929 cagggattcagaggtacctactgagaccctgtct----caaacaaacaaacaaacaaaca 874
Query: 61 aacaaacaaacccaaaatgctatattactggtggttaccactgtcatggaggcagtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 aacaaacaaacccaaaatgctatattactggtggttaccactgtcatggaggcagtgcca 814
Query: 121 gagaatgtttagacattaaaatctgtaattaacaggaggccagcagaaacaaaaccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gagaatgtttagacattaaaatctgtaattaacaggaggccagcagaaacaaaaccacag 754
Query: 181 aagggagttctacccacagaggcatgcttcctgagattggaacgaagaagcaaaaggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aagggagttctacccacagaggcatgcttcctgagattggaacgaagaagcaaaaggcat 694
Query: 241 gctctctctttccccagggtttggaacccagtcccaaatgccttcttgctggtgacgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gctctctctttccccagggtttggaacccagtcccaaatgccttcttgctggtgacgggg 634
Query: 301 gactgcctttttccttatccttaagggctatcctggcttctctcaccctttcttctcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gactgcctttttccttatccttaagggctatcctggcttctctcaccctttcttctcaga 574
Query: 361 ctcttaatatgcctttatttgcaagccagtgctcttgctgtcccggatgttatcaccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctcttaatatgcctttatttgcaagccagtgctcttgctgtcccggatgttatcaccctg 514
Query: 421 acagtagctgctctggggcgaacacactgggaaaacaatcgagactacagataaaccaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acagtagctgctctggggcgaacacactgggaaaacaatcgagactacagataaaccaag 454
Query: 481 actgccaactttgcccactcaacaagtcctctctggggacaattagggccagaaaataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 actgccaactttgcccactcaacaagtcctctctggggacaattagggccagaaaataaa 394
Query: 541 tattgacacattagactatttcctcgttggttttctggtgattgtctgagcaatctgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tattgacacattagactatttcctcgttggttttctggtgattgtctgagcaatctgatg 334
Query: 601 ggggcaaaattccacttttctgataagcgattcttgggctaatagaaacaaataaagtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggggcaaaattccacttttctgataagcgattcttgggctaatagaaacaaataaagtaa 274
Query: 661 ag 662
||
Sbjct: 273 ag 272
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
