TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCATAAAATACCCAACCAGGGTGATTTTTTCTTTTATTTTTAGTATT
TTTATATTACTTAGTATATTATTTTCCCCCATGAAAAACTGACATCATAA
CTCCACATATCTCCACACATTTCTACTTGCTTTTACATTGTGAGTTTTTC
CTTCTTTGCATTAATCAGTAGCTACTGGCTGTGTGTGGTGACTTCACACG
ATGTGAGACTGTTTCTCTCTGTATTTCTACCTCTGGTCAGCAGAAGTGCT
CAGCTTATATTTGCAGTGAGCCATTTTACTCCGAATGCTATTAATCTCCC
TGCTAGCTATTACATGGCCTGGCCTGAGAATGAAACATGACACTTGTGTG
CATGATTAACTGCAAAGCATATTTCTGACTGCCACCTAAGCACAAGATGA
CCAAGAAGAATGAGCCCCCCCTTCTTCTCAGAAGGTAGGGAGCCATCAGT
GCTTATAGAGAACATAGATGGCTTCAGCCCTAACTCTACAGAGCAAACAA
CATGTCACTGAATAAAGAATGTTTGAGTCTGGAAATGGACCGCAATGTAT
TCAGCTATCCTTAGTTTTTTTTGGACATTCTGGTTCTTTACTGCTCTGAG
AATTATAAAACATATCTATATTGTCTTTGATTTTGCTTCTGGGTTTTGCT
TCTGGCATATGTTCATGAACACAAAN

CGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTTGGCTGTGTGCTAATAGTTAC
TGATTACTCCTCCTTTCTGACTTCACTGTAAAGACAGCCTCACTGCAACA
GTGCCACCTACTGAAACAAGGAGTGATGCTCTCTTACTGAGATGCTTATC
TTGATGCTTTCCAAACACCATGTAACTTACAGTTAATGCTAATCTTCCCA
GACACCTGGCTAGTAAAAAGGTGAAGGCTCGGGTCAAGTCTTTAGGGAAG
AGCATTAGGGGAAACATGATGTGGCAATCAAATGTGAAAAAGGAGCTTCT
AGCACAGTTCTGGGAATCTACCACGCCCTTTGAAAAGTCAGTGATATGAG
ATTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTTTTTT
CTTCTCCCTCTTATTTTCCCCTTTCCCCCTATTTTTTTTTTTTTCTATTC
CCCCTCCTTCTCTCGTTTCTTTTTTCTCTTTTTTTTCTCTATCCCCTTCA
CTTTTCTTGCTCTCCCATTCTCCCTTTCCTTTTTTCCCTCCCATCTCACA
CTTTTTTTTCCCCGCCCCCCTCTTTTTCCTCCATCCTTCTTTCCTTTTTT
TTTTTACTCCCCCGCCCCCCTTATTTTTTATTCATTACTCCCCACCTCTT
ATCCCCTTTTTCTTTTTTTATTCCCCCTTCTTCCTTTCTCTTTTTTCCCC
CTTTTTATTTTTACTTTTCG

Query= MSMg01no179_g04.b1 MSMg01no179_g04.b1 CHROMAT_FILE:
MSMg01no179_g04.b1 PHD_FILE: MSMg01no179_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:23 2005
         (476 letters)



>mm_chr2_147522533_147523408
          Length = 876

 Score =  905 bits (468), Expect = 0.0
 Identities = 474/476 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccagggtgattttttcttttatttttagtatttttatattacttagtatattattttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ccagggtgattttttcttttatttttagtatttttatattacttagtatattattttccc 674

                                                                       
Query: 61  ccatgaaaaactgacatcataactccacatatctccacacatttctacttgcttttacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ccatgaaaaactgacatcataactccacatatctccacacatttctacttgcttttacat 614

                                                                       
Query: 121 tgtgagtttttccttctttgcattaatcagtagctactggctgtgtgtggtgacttcaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgtgagtttttccttctttgcattaatcagtagctactggctgtgtgtggtgacttcaca 554

                                                                       
Query: 181 cgatgtgagactgtttctctctgtatttctacctctggtcagcagaagtgctcagcttat 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 553 cgatgtgagactgtttctctctgtatttctaactctggtcagcagaagtgctcagcttat 494

                                                                       
Query: 241 atttgcagtgagccattttactccgaatgctattaatctccctgctagctattacatggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atttgcagtgagccattttactccgaatgctattaatctccctgctagctattacatggc 434

                                                                       
Query: 301 ctggcctgagaatgaaacatgacacttgtgtgcatgattaactgcaaagcatatttctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctggcctgagaatgaaacatgacacttgtgtgcatgattaactgcaaagcatatttctga 374

                                                                       
Query: 361 ctgccacctaagcacaagatgaccaagaagaatgagcccccccttcttctcagaaggtag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgccacctaagcacaagatgaccaagaagaatgagcccccccttcttctcagaaggtag 314

                                                                   
Query: 421 ggagccatcagtgcttatagagaacatagatggcttcagccctaactctacagagc 476
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggagccatcagtgcttagagagaacatagatggcttcagccctaactctacagagc 258


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space:   403556
Effective search space used:   403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no179_g04.g1 MSMg01no179_g04.g1 CHROMAT_FILE:
MSMg01no179_g04.g1 PHD_FILE: MSMg01no179_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:23 2005
         (367 letters)



>mm_chr2_147482319_147483085
          Length = 767

 Score =  702 bits (363), Expect = 0.0
 Identities = 366/367 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttggctgtgtgctaatagttactgattactcctcctttctgacttcactgtaaagaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttggctgtgtgctaatagttactgattactcctcctttctgacttcactgtaaagaca 260

                                                                       
Query: 61  gcctcactgcaacagtgccacctactgaaacaaggagtgatgctctcttactgagatgct 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gcctcactgcaacagtgccacctactgaaacagggagtgatgctctcttactgagatgct 320

                                                                       
Query: 121 tatcttgatgctttccaaacaccatgtaacttacagttaatgctaatcttcccagacacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcttgatgctttccaaacaccatgtaacttacagttaatgctaatcttcccagacacc 380

                                                                       
Query: 181 tggctagtaaaaaggtgaaggctcgggtcaagtctttagggaagagcattaggggaaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggctagtaaaaaggtgaaggctcgggtcaagtctttagggaagagcattaggggaaaca 440

                                                                       
Query: 241 tgatgtggcaatcaaatgtgaaaaaggagcttctagcacagttctgggaatctaccacgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatgtggcaatcaaatgtgaaaaaggagcttctagcacagttctgggaatctaccacgc 500

                                                                       
Query: 301 cctttgaaaagtcagtgatatgagattctctccctctccctctccctctccctctccctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctttgaaaagtcagtgatatgagattctctccctctccctctccctctccctctccctc 560

                  
Query: 361 tccctct 367
           |||||||
Sbjct: 561 tccctct 567


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space:   271364
Effective search space used:   271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)