Query= MSMg01no179_h04.b1 MSMg01no179_h04.b1 CHROMAT_FILE:
MSMg01no179_h04.b1 PHD_FILE: MSMg01no179_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:28 2005
(610 letters)
>mm_chr2_124615467_124616476
Length = 1010
Score = 1073 bits (555), Expect = 0.0
Identities = 594/607 (97%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 5 gaattccttttggctgtgagtctctgaggctctgtctcactcctcagaggcagtttcagc 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcttggctgtgagtctctgaggctctgtctcactcctcagaggcagtttcagc 264
Query: 65 ctgtgtcttcccacactatgcactgtgatttgtatgaggatagtagcacttctggccagc 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgtcttcccagactatgcactgtgatttgtatgaggatagtagcacttctggccagc 324
Query: 125 tacaccaattccatttgaacagaccattaataaatgcagatcctcagaacccaagccgaa 184
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 325 tacaccaattccatttgaacagaccattaataaattcagatcctcaggacccaagccgaa 384
Query: 185 aggaccaatgtagaacacctatgtgggaccccacaaatgtggatttctgatgacaattcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggaccaatgtagaacacctatgtgggaccccacaaatgtggatttctgatgacaattcc 444
Query: 245 agatacgtctgaagcaggtgccaatctgtggactattgactttgagccattgctgaaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agatacgtctgaagcaggtgccaatctgtggactattgactttgagccattgctgaaaac 504
Query: 305 caccggtttctcctcta-tcacttcctactctcagaactgatctgactcagcatcatgaa 363
||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cactggtttctcc-caaatcacttcctactctcagaactgatctgactcagcatcatgaa 563
Query: 364 ctggcacacacgcacaagctgagggtcgatgaggagagtgacctttgggtccccattcga 423
|||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctggcacaaatgcagaagctgagggtcgatgaggagagtgacctttgggtccccattcgg 623
Query: 424 tggctacctggaaattgtggccttcccttctattagcttatttatatataattacagaga 483
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggctacctgaaaattgtggccttcccttctattagcttatttatatataattacagaga 683
Query: 484 tgagccatggagattagaaggtggcactctccactcatttaatctttggtcccattacca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgagccatggagattagaaggtggcactctccactcatttaatctttggtcccattacca 743
Query: 544 gatcatagaactcataattagtaatttcaacttaaaactagtgcctctaactccagtatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gatcatagaactcataattagtaatttcaacttaaaactagtgcctctaactccagtatg 803
Query: 604 tttggaa 610
|||||||
Sbjct: 804 tttggaa 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_h04.g1 MSMg01no179_h04.g1 CHROMAT_FILE:
MSMg01no179_h04.g1 PHD_FILE: MSMg01no179_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:28 2005
(298 letters)
>mm_chr2_124777509_124778206
Length = 698
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%)
Strand = Plus / Minus
Query: 1 aaaccaagtgagccgagatcattttataaagaaatcctaatgggatgctttgctttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaaccaagtgagccgagatcattttataaagaaatcctaatgggatgctttgctttgttt 439
Query: 61 ttctgggcacttgtttcaaacagtacctcttcgaaatgtgtctgacaaacaaagggttct 120
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 438 ttctgggcacttgtttcaaacagcacctcttcgaaatgtgtctgacaaacatagggttct 379
Query: 121 ggtgatcagatggggaaactgaggcacaagatctgaggttttcccaagcttgtccagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtgatcagatggggaaactgaggcacaagatctgaggttttcccaagcttgtccagaga 319
Query: 181 aggactaaatgcactagaataaagcctgagcgaccttgggttccacgcagatccaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aggactaaatgcactagaataaagcctgagcgaccttgggttccacgcagatccaaaggg 259
Query: 241 gttccttcagcaccattctggcccctctggagggggcttgaatggtcactttcctaac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gttccttcagcaccattctggcccctctggagggggcttgaatggtcactttcctaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
