Query= MSMg01no179_h11.b1 MSMg01no179_h11.b1 CHROMAT_FILE:
MSMg01no179_h11.b1 PHD_FILE: MSMg01no179_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:29 2005
(631 letters)
>mm_chr2_33993005_33994036
Length = 1032
Score = 1137 bits (588), Expect = 0.0
Identities = 618/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 ctggctcaaactcacagagatcctcctgcctctgccttctgagtgggacttaagctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ctggctcaaactcacagagatcctcctgcctctgccttctgagtgggacttaagctgaga 260
Query: 61 tttaagactcagatgaatgaattctttttttcttttatttaagcatttaaaatttttctt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaagactcagctgaatgaattctttttttcttttatttaagcatttaaaatttttctt 320
Query: 121 atatgcacatgggtgttttgcctgcacgtgtgtctatgcatcatgcgtgtgtctggtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgcacatgggtgttttgcctgcacgtgtgtctatgcatcatgcgtgtgtctggtgtc 380
Query: 181 ttcagaagccaagaggacatcagttctcctgggactggagggataaacagttgtgagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagaagccaagaggacatcagttctcctgggactggagggataaacagttgtgagcaa 440
Query: 241 ccatgtgggagcggagtgctctgtcagtgctcttagccgctgagccatctctccagcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatgtgggagcggagtgctctgtcagtgctcttagccgctgagccatctctccagcctc 500
Query: 301 ccacaagtgatcagtgaatgcattctcactgtaaaactgtaaacaacccacatgaagtgc 360
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ccacaagtgatcagtgaatacattctcactgtaaaactgtaaacaacccagatgaagtgc 560
Query: 361 cctggtcactctgctgcacagactgcaggcttggcagggagtgagctgggaaccactggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctggtcactctgctgcacagactgcaggcttggcagggagtgagctgggaaccactggg 620
Query: 421 gcagcctcagagcagcactgccttcagag-gcctctggcctcaaaacacccaaagtagag 479
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 gcagcctcagagcagcactgccttcagaaagcctctggcctcaaaacacccaaagtagag 680
Query: 480 agaaccaagtgctcctgatgtttgccccgtggacagacccctggatatgtgctgacgtta 539
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 681 agaaccaagtgctcctgatgtttgccccatggacagacccctgtatatgtgctgatgtta 740
Query: 540 gttcaggtgcctgtgtcattgattatttgtctgtctgaatgtccccaccaaaactgtcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcaggtgcctgtgtcattgattatttgtctgtctgaatgtccccaccaaaactgtcat 800
Query: 600 gagcccctcccctgccctgactcctcgg 627
| ||||||||||||||||||||||||||
Sbjct: 801 gggcccctcccctgccctgactcctcgg 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_h11.g1 MSMg01no179_h11.g1 CHROMAT_FILE:
MSMg01no179_h11.g1 PHD_FILE: MSMg01no179_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:29 2005
(234 letters)
>mm_chr2_34143908_34144541
Length = 634
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Minus
Query: 1 ataagctgagctcagtgaagggagccagaacatgaaatgatgctgagagaacgtctggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ataagctgagctcagtgaagggagccagaacatgaaatgatgctgagagaacgtctggga 374
Query: 61 gatgagaggtacagaattacaagcgaaagtgcaggcctgctgaggcaattacagcttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gatgagaggtacagaattacaagcgaaagtgcaggcctgctgaggcaattacagcttaat 314
Query: 121 ggggtcatttggaaggcaattgccaggggttaatgtagtatggagagatgaggtgagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggggtcatttggaaggcaattgccaggggttaatgtagtatggagagatgaggtgagatt 254
Query: 181 gaagtgaaatttggggctgtaaatgtgttaagatgaaagatcagagagcagca 233
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 253 gaagtgaaatttggggctggaaatgtgttaagatgaaagatcagagagcagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
