Query= MSMg01no179_l16.b1 MSMg01no179_l16.b1 CHROMAT_FILE:
MSMg01no179_l16.b1 PHD_FILE: MSMg01no179_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:49 2005
(556 letters)
>mm_chr2_149520428_149521382
Length = 955
Score = 982 bits (508), Expect = 0.0
Identities = 541/552 (98%), Gaps = 1/552 (0%)
Strand = Plus / Plus
Query: 5 gaattctacaagtctcctcaccaggtacttgctaaatacagatgatcacttcagtgagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacaagtctcctcaccaggtacttgctaaatacagatgatcacttcagtgagaa 264
Query: 65 gctgttctcacccactcttaccttcctaggattatttccttagccaaaacacctgatgaa 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatgttctcacccactcttaccttcctaggattatttccttagccaaaacacctgatgaa 324
Query: 125 cagagaagcattagactcggatctcagagttctgagaactgagcttactcactatgtata 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagagaagcattagactcagatctcagagttctgagaactgagcttactcactatgtata 384
Query: 185 gaaacatgaaaaccagcatgcttggttatatatgcattgaaatgatatgttacttgtatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaacatgaaaaccagcatgcttggttatatatgcattgaaatgatatgttacttgtatg 444
Query: 245 ctgtgacagacagaatttggacattcagatgatgaggaggccattcttctgatgctgagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgtgacagacagaatttggacattcagatgatgaggaggccattcttctgatgctgagt 504
Query: 305 tgatttcattagctaacttccccttctgttttcaacagtttatgggtcactggcactata 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 505 tgatttcattagctaacttccccttctgttttcaacagtttatgggtcactgacactata 564
Query: 365 aaattacccaccgagcactgtgagtggcagagaagacaaacagatcttgtgtttagtact 424
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaattacatagtgagcactgtgagtggcagagaagacaaacagatcttgtgtttagtact 624
Query: 425 cgctatccttttgaatcaataaaataaaagcacaggattgtgaacagagaggtgattttt 484
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 cgctatccttttgaatcaataaaataaaaacacaggattgtgaacagagaggtgatttt- 683
Query: 485 gtatttgaaagtgtcaagagttcagaacagataaacaatcctttaaaatatagagaagca 544
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 684 gtacttgaaagtgtcaagagttcagaacaaataaacaatcctttaaaatatagagaagca 743
Query: 545 aaatattaatgg 556
||||||||||||
Sbjct: 744 aaatattaatgg 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 955
Length adjustment: 10
Effective length of query: 546
Effective length of database: 945
Effective search space: 515970
Effective search space used: 515970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_l16.g1 MSMg01no179_l16.g1 CHROMAT_FILE:
MSMg01no179_l16.g1 PHD_FILE: MSMg01no179_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:49 2005
(305 letters)
>mm_chr2_149653446_149654150
Length = 705
Score = 567 bits (293), Expect = e-166
Identities = 302/305 (99%)
Strand = Plus / Minus
Query: 1 tcagagatttgtgaggtgagtggggccagttcctgtgttgtgaggaactgtcactcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagagatttgtgaggtgagtggggccagttcctgtgttgtgaggaactgtcactcaggt 446
Query: 61 gctgaacaagctgtcaagcctttggatagcagagataggggacgtgataaggagaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctgaacaagctgtcaagcctttggatagcagagataggggacgtgataaggagaataca 386
Query: 121 gatttaagagttttgttgttggtttcttgttagatagaaaccacttctaagtgtgcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 gatttaagagttttgttgttggtttcttgttagatagaaaccacttctaagtgtgtattt 326
Query: 181 aactaaaaagctctaaaattgaagattattaaaagtatcaggatgatttgtgccatgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aactaaaaagctctaaaattgaagattattaaaagtatcaggatgatttgtgccatgtgt 266
Query: 241 ttaggtgtctacagctctcatccaaaaatcatctttaatagaaatgtttaaccttctcta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaggtgtcaacagctctcatccaaaaatcatctttaatagaaatgtttaaccttctcta 206
Query: 301 gttga 305
|||||
Sbjct: 205 gttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
