Query= MSMg01no180_g17.b1 MSMg01no180_g17.b1 CHROMAT_FILE:
MSMg01no180_g17.b1 PHD_FILE: MSMg01no180_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:39 2005
(669 letters)
>mm_chr2_6711492_6712557
Length = 1066
Score = 1118 bits (578), Expect = 0.0
Identities = 636/657 (96%), Gaps = 7/657 (1%)
Strand = Plus / Minus
Query: 5 gaattcacatctttgtctcttgtctggcagtagtatgctgtctggttttcatcaggtcca 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcacatctttg-cttttgtctggcagtagtatgctgtctggttttcatcaggtcca 798
Query: 65 aaagaaactgttacacctgacttactgtggcgcctgttagctggccttcagctccctcag 124
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaagaaactgggacaaatgacttactgtggcgcctgttagctggccttcagctccctcag 738
Query: 125 catcacaagtactgttagagtccatgctagcaccctggctcctatcagccttctcagcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 catcacaagtactgttagagtccatgctagcaccctggctcctatcagccttctcagcct 678
Query: 185 gcccctaccataaacttctccagctcatgggcattgcctcctgcagcttctcactcctac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gcccctaccataaacttctccagctcatgggcattgcctcctgcagcttctcactcctac 618
Query: 245 agaaccttgcacttgagctgtacaccctcatcgctctcttggtcctccat--ctcccttg 302
| ||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||
Sbjct: 617 ataaccttgcacttgagctgtgcaccctcatcgctctc-tggtcctc--tggctcccttg 561
Query: 303 ctccagtccttttgtattctcctcagccccctactgaatggcctgattctgtctactggt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctccagtccttttgtattctcctcagccccctactgaatggcctgattctgtctactggt 501
Query: 363 cctgtttagtcaactactttctcttcccactttggtctcttcagattcctttccctcaaa 422
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 500 cctgtttagtcaactactttctcttcccactttggactcttcagattcctctcccttaaa 441
Query: 423 tctacaataaaaatcctcaaccgtatcttggagcaatcatgtcctaattctatatagtta 482
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctac-ataaaaatcctcaaccatatcttggagcaatcatgtcctaattctatatagtta 382
Query: 483 tattctgaataatttcagcacatgtaatttgaatgtaatccccaaacaatgccaagtgtc 542
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tattctgaataatttcagcacatgtcatttgaatgtaatccccaaacaatgccaagtgtc 322
Query: 543 ccactctgtggctgaatgttgtcctttgtgctgcttggctttaggctttaaaagaagaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccactctgtggctgaatgttgtcctttgtgctgcttggctttaggctttaaaagaagaaa 262
Query: 603 aactaanacatttactttaatatgcatgtagtgagttgtgtgcgctcatatatgtat 659
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactaaaacatttacttttatatgcatgtagtgagttgtgtgcgctcatatatgtat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1066
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1056
Effective search space: 695904
Effective search space used: 695904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_g17.g1 MSMg01no180_g17.g1 CHROMAT_FILE:
MSMg01no180_g17.g1 PHD_FILE: MSMg01no180_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:39 2005
(646 letters)
>mm_chr2_6588639_6589684
Length = 1046
Score = 1203 bits (622), Expect = 0.0
Identities = 640/646 (99%)
Strand = Plus / Plus
Query: 1 atttccaggtcagatgtagcaccatatggcttagccatcagatctagaccccagcctctc 60
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 atttccaggtcagatgtagcaccatatggcttagccatcagatctagagacaagcctctc 260
Query: 61 tccttctgcatgttctgcttcaataccagtttttcaaggtgggtggctaaacacctacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttctgcatgttctgcttcaataccagtttttcaaggtgggtggctaaacacctacaa 320
Query: 121 tacccagatggtatccatggtcagtggctgcaacatatatcagaggggttagctgtcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacccagatggtatccatggtcagtggctgcaacatatatcagaggggttagctgtcttc 380
Query: 181 tggcagtgttcattactgaagctcctcgttcacaggtaccaagaaaagcgttgttcccct 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tggcagtgttcattactgaagctcctcgatcacaggtaccaagaaaagcgttgttcccct 440
Query: 241 gcagagaagagcggtaagcatcccagggactctgaggataaccaaaatgaatactgtgtg 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gcagagaagagcggtaagcatcccagggactctgaggataactaaaatgaatactgtgtg 500
Query: 301 actcgtgtgcttccacaagttcaaacctgtctatttctgctttatgctgctttccttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcgtgtgcttccacaagttcaaacctgtctatttctgctttatgctgctttccttttg 560
Query: 361 tgctttatgtttttctattttgctcatgtgatactatttaatgagcacatacactttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctttatgtttttctattttgctcatgtgatactatttaatgagcacatacactttata 620
Query: 421 atttgtctcacacatatctactcatttaggagtttctgccagtgacagcatttcagtctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttgtctcacacatatctactcatttaggagtttctgccagtgacagcatttcagtctg 680
Query: 481 gacttttggcaaagttcaaatgtagaaaaacaaaaacaaacacaatgccctgattacctt 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 gacttttggcaaagttcaaatgtagaaaaacaaatacaaacacaatgccctgattacctt 740
Query: 541 atagcattccttttgtaacaacaataattaactgagttaataaaagtcagaacagaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atagcattccttttgtaacaacaataattaactgagttaataaaagtcagaacagaaaaa 800
Query: 601 acatttaatcatccttcatgtgtccattatcaacaactccctactg 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acatttaatcatccttcatgtgtccattatcaacaactccctactg 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
