ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAACACATTCACAACGCTGGCTGATTATTCTTGGTTCCTAGAAAGAA
ATGCAGGAGAACGATATTGCTCCCTACAAGTCTTTGGATGATTCAGGAAA
CCAAGACATCTGGAAAGATGAGCAGAAGTACTCCTTGTACCTAACAGAAT
TTATCTCTAGGTAGATTTATCTTGGAAGCTGAGCTCCATTTAAGAAAGGG
AGAATCAGATAGCCAACTAACTATTATTTGGCCCAATGAAGTTGGAAAAT
CACATTCAAGCAGAAGAAACAGGGTTTCAAAATGCCTTTTGCATGTGGAA
GGACACTGAGCCCCCTAAGATCAACAGACTTTTCTAGAGTGAAGCACGTC
TTTTAAAGAAAAATCTCCTATAGTTTAAATCTGTATACCTTCATGTTTGT
TTCTAAAATAAGGCTCTTAGCAAAGCCTTTGAAATAAGCTAATCCATAAA
CAGCGCTATGCAGTAAGAGTCTAGATAGAAGACTTTGCAACTTTGTCTTT
TTGCCTTTAAAAGTCAGAAATACATTCAATCTCTGTAATGATCTCATTTC
CTGAAAGGAGTCCAACTGCAGACAAAGGGAGGTTCCCTTCTAGAAGCCAG
AGAAAGGCTGCTTGAAAAACTATTGATTTGTAGCGGAACCTTTAGGACCC
ATTTAAAAATTGGT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTTGCTTCTGGTGTCCAATTTACAGAA
CTCAGAATTGTCTTGTCTCCAACTCCCCCTTAAAATGGGTGCTTGCCAGG
CAGTGGTGGTACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC
AGATTTCTGAGTTCGAGGCCAGCCTGGCCTACAGAGTGAGTTCTAGGACA
GCCAGGTCTACACAGAGAAACCCTGTCTCAGGGGGAAAAAAAAAGGCGCT
TGCTCCATGGATAGCCTGGAGTGCTTCCACAAGTGTTGCCATGGAATCAG
CTGGTAGCTTCTGTGTATGCCTCGCCCCCACACAAGGGATTGGCTTTGGA
ATGACATGTATCACATTCACCTAGGACCCCGTTCCACAAAGGTCTTCCTA
ATCACTCCAATTTATTCTCCCTCTCAGGACTGAGTTGAGGGATGTTGTAG
TGTTTGCTCTGCAGGGGCTGGAGTTATAATGGTGGGTTAAATGTGGACCA
ATGTCCAGAGGAGATGGAGGATAGGGCAATTAAAAATCTGGAAGATTAAA
GCTTTATATATATATATATATATATATATATATATATATATTTATATATA
TATCCCTATACCCATCTTTCTTTATATCTTTCCTTCTTTCTCATCCTTTC
TAACTCGTTCGCCTTCATACAAT

Query= MSMg01no180_m01.b1 MSMg01no180_m01.b1 CHROMAT_FILE:
MSMg01no180_m01.b1 PHD_FILE: MSMg01no180_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:04 2005
         (508 letters)



>mm_chr2_63669430_63670337
          Length = 908

 Score =  890 bits (460), Expect = 0.0
 Identities = 493/504 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaacacattcacaacgctggctgattattcttggttcctagaaagaaatgcagg 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaacacatccaaaacgctggctgattattcttggttcctagaaagaaatgcagg 264

                                                                       
Query: 65  agaacgatattgctccctacaagtctttggatgattcaggaaaccaagacatctggaaag 124
           ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 agaacaatattgctccatacaagtctttggatgatccaggaaaccaagacatctggaaag 324

                                                                       
Query: 125 atgagcagaagtactccttgtacctaacagaatttatctctaggtagatttatcttggaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgagcagaagtactccttgtacctaacagaatttatctctaggtagatttatcttggaa 384

                                                                       
Query: 185 gctgagctccatttaagaaagggagaatcagatagccaactaactattatttggcccaat 244
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 gctgagctccatttaagaaagggagaatcagatagccaaccaactattatttggcccaat 444

                                                                       
Query: 245 gaagttggaaaatcacattcaagcagaagaaacagggtttcaaaatgccttttgcatgtg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaagttggaaaatcacattcaagcagaagaaacagggtttcaaaatgccttttgcatgtg 504

                                                                       
Query: 305 gaaggacactgagccccctaagatcaacagacttttctagagtgaagcacgtcttttaaa 364
           |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 505 gaaggacactgagctccctaagatcaacagacctttccagagtgaagcacgtcttttaaa 564

                                                                       
Query: 365 gaaaaatctcctatagtttaaatctgtataccttcatgtttgtttctaaaataaggctct 424
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 gaaaaatctcctatagtttaaatctgtataacttcatgtttgtttctaaaataaggctct 624

                                                                       
Query: 425 tagcaaagcctttgaaataagctaatccataaacagcgctatgcagtaagagtctagata 484
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagcaaagcctttgcaataagctaatccataaacagcgctatgcagtaagagtctagata 684

                                   
Query: 485 gaagactttgcaactttgtctttt 508
           ||||||||||||||||||||||||
Sbjct: 685 gaagactttgcaactttgtctttt 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)